Ss1.1-Pig3-SRG8025K05.5
|
ATCATTATTTGGCTGCTGGCTGGCTTGGCCAGTTTGCCAACTATAATCCACCGCAATGTA
TTTTTCATCGAAAATACCAATATCACAGTTTGTGCTTTCCACTATGAATCCCAAAATTCA
ACACTCCCTGTAGGTCTGGGCCTAACCAAGAATATACTGGGTTTCCTGTTTCCTTTTCTG
ATCATCCTTACAAGTTATACTCTTATTTGGAAAGCCCTAAAGAAGGCTTATGAAATTCAG
AAGAACAAACCAAGAAATGATGATATTTTCAAGATAATTATGGCAATTGTGCTTTTCTTT
TTCTTTTCGTGGGTTCCCCACCAAATATTCACTTTTCTGGATGTACTGATTCAGTTGGGC
ATCATACATGACTGTAAAATTGCAGATATTGTCGACACCGCCATGCCCATCACTATTTGC
TTGGCGTATTTTAACAACTGCCTGAATCCTCTCTTTTATGGCTTTCTGGGGAAAAAATTT
AAAAAATATTTTCTCCAGCTTCTGAAATACATTCCTCCAAAGGCCAAATCCCACTCAAGC
CTGTCTACAAAAATGAGCACACTTTCCTACCGCCCCTCAGAAAATGGAAGCTCTTCCACC
AAGAAGTCTGCCCCATGTACTGAAGTTGAGTGACACACTTGAAACCTGTGAAGTCATCTT
GTGAAAGAAAGAGCAAGAGAAACATTCCTCTACAACACTTTGCTAGTAAATGAGCACGAG
CTACTTTTTAGAATTTAAGAAGAGAATGGATTATGTGGACTGAACTGACTTTTCTAATGC
TCTGAACAAAAGCTTTTCTTTCCCTTTGCACCTATACAAAGCAGAGTCACATGTTGCCAC
ATTTCGCATTAGATAGATGATGTCCACTCAAAGGACCATGTCAGAAACTGAATGAATGTG
TTGATTTGGAAAATTTTACCAGTATAAATGCCATCCTCCCAGTCGACTCTTGTTCTGTTA
TTTTTGATTTCCACAAAAAGGTCCTCAGAATATGTTAAACCTTGAGAGGAGCAACAGGAG
ATCTAAGCTCAAGATTTCTCTGTCCAATTTCCAAAGGGCAGTAAAGCTTTTGTGCCTATT
TAGCTATTATCAACTATGGCTCCATTGTACCTGCTACTGCACATTTTGTCAGGTTTCAGA
AACTTTTGTGAAATTCAACCAGTGTTGTATAGATTCATACTGCCAAAATATGCCAGCTAA
ATGATTTATTTGTATAATGATGTTACTGAAGTCACGAAAAAAAATTAAACTACTTGTAAA
GGTGTTATTCTGGTCCCAGGTAGTAGTGTCTTCCTAGTCATATTAGTTTTATTTCATATC
TGAGAAGTATATATATATTGTGGTAAAAAGATTATATATCATAAAGTATGCCTTACTGTT
TTAAAAATTATATATTCTACCTATATATGTATATGTATATCTCTAAAATGTTGTTACTTT
ATTAAAATCCAGCAAAGTTATATTCACATTAAAATA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATCATTATTTGGCTGCTGGCTGGCTTGGCCAGTTTGCCAACTATAATCCACCGCAATGTA
TTTTTCATCGAAAATACCAATATCACAGTTTGTGCTTTCCACTATGAATCCCAAAATTCA
ACACTCCCTGTAGGTCTGGGCCTAACCAAGAATATACTGGGTTTCCTGTTTCCTTTTCTG
ATCATCCTTACAAGTTATACTCTTATTTGGAAAGCCCTAAAGAAGGCTTATGAAATTCAG
AAGAACAAACCAAGAAATGATGATATTTTCAAGATAATTATGGCAATTGTGCTTTTCTTT
TTCTTTTCGTGGGTTCCCCACCAAATATTCACTTTTCTGGATGTACTGATTCAGTTGGGC
ATCATACATGACTGTAAAATTGCAGATATTGTCGACACCGCCATGCCCATCACTATTTGC
TTGGCGTATTTTAACAACTGCCTGAATCCTCTCTTTTATGGCTTTCTGGGGAAAAAATTT
AAAAAATATTTTCTCCAGCTTCTGAAATACATTCCTCCAAAGGCCAAATCCCACTCAAGC
CTGTCTACAAAAATGAGCACACTTTCCTACCGCCCCTCAGAAAATGGAAGCTCTTCCACC
AAGAAGTCTGCCCCATGTACTGAAGTTGAGTGACACACTTGAAACCTGTGAAGTCATCTT
GTGAAAGAAAGAGCAAGAGAAACATTCCTCTACAACACTTTGCTAGTAAATGAGCACGAG
CTACTTTTTAGAATTTAAGAAGAGAATGGATTATGTGGACTGAACTGACTTTTCTAATGC
TCTGAACAAAAGCTTTTCTTTCCCTTTGCACCTATACAAAGCAGAGTCACATGTTGCCAC
ATTTCGCATTAGATAGATGATGTCCACTCAAAGGACCATGTCAGAAACTGAATGAATGTG
TTGATTTGGAAAATTTTACCAGTATAAATGCCATCCTCCCAGTCGACTCTTGTTCTGTTA
TTTTTGATTTCCACAAAAAGGTCCTCAGAATATGTTAAACCTTGAGAGGAGCAACAGGAG
ATCTAAGCTCAAGATTTCTCTGTCCAATTTCCAAAGGGCAGTAAAGCTTTTGTGCCTATT
TAGCTATTATCAACTATGGCTCCATTGTACCTGCTACTGCACATTTTGTCAGGTTTCAGA
AACTTTTGTGAAATTCAACCAGTGTTGTATAGATTCATACTGCCAAAATATGCCAGCTAA
ATGATTTATTTGTATAATGATGTTACTGAAGTCACGAAAAAAAATTAAACTACTTGTAAA
GGTGTTATTCTGGTCCCAGGTAGTAGTGTCTTCCTAGTCATATTAGTTTTATTTCATATC
TGAGAAGTATATATATATTGTGGTAAAAAGATTATATATCATAAAGTATGCCTTACTGTT
TTAAAAATTATATATTCTACCTATATATGTATATGTATATCTCTAAAATGTTGTTACTTT
ATTAAAATCCAGCAAAGTTATATTCACATTAAAATA
|
|
gi|231521|sp|P30555|AG2R_PIG |
Protein identifier
|
gi|231521|sp|P30555|AG2R_PIG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-985, gnl|bosTau2|chr1 (74314288-74313307) |
|
1-985, gnl|Hg17|chr3 (149941968-149942939) |
|
1-985, gnl|Mm7|chr13 (29746948-29747890) |
| |
|
1126-1473, gnl|bosTau2|chr1 (74312498-74312175) |
|
1126-1473, gnl|canFam2|chr23 (46668355-46668746) |
|
1126-1473, gnl|echTel1|scaffold_323445 (696-290) |
|
1126-1473, gnl|hg17|chr3 (149942987-149943384) |
|
1126-1473, gnl|Hg17|chr3 (149943114-149943474) |
|
1126-1473, gnl|loxAfr1|scaffold_22 (70047-69646) |
|
1126-1473, gnl|Mm7|chr13 (29748067-29748396) |
|
1126-1473, gnl|mm7|chr3 (20045870-20045504) |
|
1126-1473, gnl|oryCun1|scaffold_205808 (70002-70400) |
|
1126-1473, gnl|panTro1|chr2 (152980952-152981349) |
|
1126-1473, gnl|rheMac2|chr2 (139049755-139049358) |
|
1126-1473, gnl|rn3|chr2 (105448755-105448329) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-985, gnl|bosTau2|chr1 (74314288-74313307) |
|
1-985, gnl|Hg17|chr3 (149941968-149942939) |
|
1-985, gnl|Mm7|chr13 (29746948-29747890) |
| |
|
1126-1473, gnl|bosTau2|chr1 (74312498-74312175) |
|
1126-1473, gnl|canFam2|chr23 (46668355-46668746) |
|
1126-1473, gnl|echTel1|scaffold_323445 (696-290) |
|
1126-1473, gnl|hg17|chr3 (149942987-149943384) |
|
1126-1473, gnl|Hg17|chr3 (149943114-149943474) |
|
1126-1473, gnl|loxAfr1|scaffold_22 (70047-69646) |
|
1126-1473, gnl|Mm7|chr13 (29748067-29748396) |
|
1126-1473, gnl|mm7|chr3 (20045870-20045504) |
|
1126-1473, gnl|oryCun1|scaffold_205808 (70002-70400) |
|
1126-1473, gnl|panTro1|chr2 (152980952-152981349) |
|
1126-1473, gnl|rheMac2|chr2 (139049755-139049358) |
|
1126-1473, gnl|rn3|chr2 (105448755-105448329) |
|
gul (0.710353) |
|
ski (0.586941) |
|
lun (0.300978) |
|
kid (0.259471) |
|
sug (0.254582) |
|
nms (0.213858) |
|
cag (0.151194) |
|
bfe (0.149858) |
|
spl (0.143184) |
|
ste (0.135208) |
|
pla (0.133672) |
|
ova (0.129132) |
|
tra (0.123092) |
|
gul (0.710353) |
|
ski (0.586941) |
|
lun (0.300978) |
|
kid (0.259471) |
|
sug (0.254582) |
|
nms (0.213858) |
|
cag (0.151194) |
|
bfe (0.149858) |
|
spl (0.143184) |
|
ste (0.135208) |
|
pla (0.133672) |
|
ova (0.129132) |
|
tra (0.123092) |
