Ss1.1-Pig3-SRG8025L20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAGCCCCCGCCGGGGACCCTAGCCCTGCTCCTGGACGAAGGCAGTAAGCAGCTGCCGCA GGCCATCATCATCGGCGTGAAGAAGGGCGGCACGCGGGCGCTGCTCGAGTTCCTGCGCGT GCACCCCGACGTGCGCGCCGTGGGCGCCGAGCCCCACTTCTTCGACCGCAGCTACGACAA GGGCCTCGCCTGGTACCGGGACCTGATGCCGCGGACCCTGGACGGGCAGATCACCATGGA GAAGACGCCCAGCTACTTCGTGACGCGCGAGGCGCCCGCGCGCATCTCGGCCATGTCCAA GGCCACCAAGCTCATCGTGGTGGTGCGGGACCCGGTGACCAGTGCCGTCTCGGACTACAC GCAGACGCTCTCCAAGCGGCCCGACATCCCCACCTTCGAGAGCCTGACCTTCCGGAACCG GAGCGCCGGCCTCATCGACACGTCCTGGAGCGCCATCCAGATCGGCCTCTACGCCAAGCA CCTGGAGCACTGGCTGCGCCACTTCCCGCTGCGCCAGATGCTCTTCGTCAGCGGCGAGCG CCTCATCCGCGACCCGGCCGGCGAGCTGGGCCGCGTGCAGGACTTCCTGGGCCTCAAGCG CATCATCAGCGACAAGCACTTCTACTTCAACCAGACCAAGGGCTTCCCCTGCCTCAAGAA GGCCGAGGGCAGCGGCCGCCCGCACTGCCTGGGCAAGACCAAGGGCAGGCCGCACCCCGA GATCGAGCGCGAGGTGCTGCGGCGGCTGCGCGACTTCTACCGGCCCTTCAACCGCAAGTT CTACCAGATGACCGGCCAGGACTTCGGCTGGGACGGCTGACAGTTTAATTTAAAAAGAAA GAGAGTATCAGAATATAATATATTTTTTTACCGGTCGGGTAGAGAAAAGGCAGTCTACTA TTTGTGCTGCAGATAATGTGTTTCCGTAGTTTTTTCAATGAATGTGAAAGAGATTTTTCT TCTCCCCGCCACCGCCGTCTTCCCGAACCGCCGACGGCCAGCATTTGGATCAACGAGAAC GGAAACCTTCAGGCGTCTCGATTCTCTCCATTTTCCATTTCTATTTTATGTTTTATATAC ATAATGATGAAGTATGAGCCTAAGTTGCATTAAAACTTTTAAGAAAATCCTGCGGGTACA GCTCTCTCGCCTTCTCTCTCTCTTTTTAAACGAAGCCCAGATAAAATTGCTATCTGTCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAGCCCCCGCCGGGGACCCTAGCCCTGCTCCTGGACGAAGGCAGTAAGCAGCTGCCGCA GGCCATCATCATCGGCGTGAAGAAGGGCGGCACGCGGGCGCTGCTCGAGTTCCTGCGCGT GCACCCCGACGTGCGCGCCGTGGGCGCCGAGCCCCACTTCTTCGACCGCAGCTACGACAA GGGCCTCGCCTGGTACCGGGACCTGATGCCGCGGACCCTGGACGGGCAGATCACCATGGA GAAGACGCCCAGCTACTTCGTGACGCGCGAGGCGCCCGCGCGCATCTCGGCCATGTCCAA GGCCACCAAGCTCATCGTGGTGGTGCGGGACCCGGTGACCAGTGCCGTCTCGGACTACAC GCAGACGCTCTCCAAGCGGCCCGACATCCCCACCTTCGAGAGCCTGACCTTCCGGAACCG GAGCGCCGGCCTCATCGACACGTCCTGGAGCGCCATCCAGATCGGCCTCTACGCCAAGCA CCTGGAGCACTGGCTGCGCCACTTCCCGCTGCGCCAGATGCTCTTCGTCAGCGGCGAGCG CCTCATCCGCGACCCGGCCGGCGAGCTGGGCCGCGTGCAGGACTTCCTGGGCCTCAAGCG CATCATCAGCGACAAGCACTTCTACTTCAACCAGACCAAGGGCTTCCCCTGCCTCAAGAA GGCCGAGGGCAGCGGCCGCCCGCACTGCCTGGGCAAGACCAAGGGCAGGCCGCACCCCGA GATCGAGCGCGAGGTGCTGCGGCGGCTGCGCGACTTCTACCGGCCCTTCAACCGCAAGTT CTACCAGATGACCGGCCAGGACTTCGGCTGGGACGGCTGACAGTTTAATTTAAAAAGAAA GAGAGTATCAGAATATAATATATTTTTTTACCGGTCGGGTAGAGAAAAGGCAGTCTACTA TTTGTGCTGCAGATAATGTGTTTCCGTAGTTTTTTCAATGAATGTGAAAGAGATTTTTCT TCTCCCCGCCACCGCCGTCTTCCCGAACCGCCGACGGCCAGCATTTGGATCAACGAGAAC GGAAACCTTCAGGCGTCTCGATTCTCTCCATTTTCCATTTCTATTTTATGTTTTATATAC ATAATGATGAAGTATGAGCCTAAGTTGCATTAAAACTTTTAAGAAAATCCTGCGGGTACA GCTCTCTCGCCTTCTCTCTCTCTTTTTAAACGAAGCCCAGATAAAATTGCTATCTGTCCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-199, gnl|bosTau2|chr19 (25934404-25934206) | |
| 1-199, gnl|canFam2|chr5 (40493158-40493317) | |
| 1-199, gnl|danRer3|chr5 (42921926-42922085) | |
| 1-199, gnl|dasNov1|scaffold_4082 (59156-59315) | |
| 1-199, gnl|echTel1|scaffold_261379 (10025-10184) | |
| 1-199, gnl|fr1|chrUn (259156965-259157124) | |
| 1-199, gnl|galGal2|chrUn (41727559-41727400) | |
| 1-199, gnl|hg17|chr17 (13444572-13444731) | |
| 1-199, gnl|Hg17|chr17 (13444770-13444572) | |
| 1-199, gnl|loxAfr1|scaffold_4741 (15762-15603) | |
| 1-199, gnl|mm7|chr11 (64518195-64518036) | |
| 1-199, gnl|Mm7|chr11 (64517995-64518193) | |
| 1-199, gnl|monDom2|scaffold_5 (115632859-115632700) | |
| 1-199, gnl|oryCun1|scaffold_203857 (100099-99940) | |
| 1-199, gnl|panTro1|chr19_random (24907638-24907479) | |
| 1-199, gnl|rheMac2|chr16 (13349053-13349212) | |
| 1-199, gnl|rn3|chr10 (50748870-50748711) | |
| 1-199, gnl|tetNig1|chr2 (590472-590313) | |
| 1-199, gnl|xenTro1|scaffold_856 (458721-458880) | |
| 202-819, gnl|bosTau2|chr25 (3113929-3114543) | |
| 202-819, gnl|Hg17|chr16 (1902204-1901590) | |
| 202-819, gnl|Mm7|chr17 (22940309-22940922) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-199, gnl|bosTau2|chr19 (25934404-25934206) | |
| 1-199, gnl|canFam2|chr5 (40493158-40493317) | |
| 1-199, gnl|danRer3|chr5 (42921926-42922085) | |
| 1-199, gnl|dasNov1|scaffold_4082 (59156-59315) | |
| 1-199, gnl|echTel1|scaffold_261379 (10025-10184) | |
| 1-199, gnl|fr1|chrUn (259156965-259157124) | |
| 1-199, gnl|galGal2|chrUn (41727559-41727400) | |
| 1-199, gnl|hg17|chr17 (13444572-13444731) | |
| 1-199, gnl|Hg17|chr17 (13444770-13444572) | |
| 1-199, gnl|loxAfr1|scaffold_4741 (15762-15603) | |
| 1-199, gnl|mm7|chr11 (64518195-64518036) | |
| 1-199, gnl|Mm7|chr11 (64517995-64518193) | |
| 1-199, gnl|monDom2|scaffold_5 (115632859-115632700) | |
| 1-199, gnl|oryCun1|scaffold_203857 (100099-99940) | |
| 1-199, gnl|panTro1|chr19_random (24907638-24907479) | |
| 1-199, gnl|rheMac2|chr16 (13349053-13349212) | |
| 1-199, gnl|rn3|chr10 (50748870-50748711) | |
| 1-199, gnl|tetNig1|chr2 (590472-590313) | |
| 1-199, gnl|xenTro1|scaffold_856 (458721-458880) | |
| 202-819, gnl|bosTau2|chr25 (3113929-3114543) | |
| 202-819, gnl|Hg17|chr16 (1902204-1901590) | |
| 202-819, gnl|Mm7|chr17 (22940309-22940922) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pro (0.512033) | |
| nca (0.136874) |