Non-Coding RNA Search

Ss1.1-Pig3-SRG8025P15.3

Sequence:


               
               ACCCATTGAGCCACCAGGGAACTCTACTTCTGTCTTTAAGGCTTTTGGTTTGCATTACCA
AGTTGACAATGATGCCGTTAGTAGCAATCCATACTACCATTAGCCGCATACATTTTGTGC
ATGCTCATTTACACCAAATTCTTACCAATACTGTGTATTGCATTTGAAGTAATCTGCCTC
TACTAACAGGCAAAAATGACATCTTTTTTTTTTTAATTGACATATAGTTGATGTAAAATA
GTATGTAAATTACACGTGTACAATATAGTGACTTTTAATTTTACAGGTTATACTCCATTT
ATAGTTATTATAAAATATTGGGTATATTCCCCATGTTGTACAATATAACCTTGTAGCATA
TTTTATACATAATAGTTTGTACTTCTTAGCCCCCTACCCATATGTTGCTCCTCCCCTCTT
CCTTCTTCCCATTTTGACAACCACTAGTTGGTTCTCTATGAGCCTGCTTCTTTGTTTGTT
GTTAGTTTGTTGTATTTTTTAGATTCCACATGTAAGTGATATCATGCGGTATTTGTCTTT
GTCTGACATATTTCACTTAGCATAATATCTTCCAAGTCCATCCATCTTGCTGCAAATGGC
AAAATTTCATTCTTTTTTATGCTGAGTAATATGACATTGTGTGTATGTGTGTGTGTATAT
AATCTTAACATCTTAATGAATTTTTAACTGTTCTTACTTTGCTTAGTAAAAAAGAAAGTA
AACAAAAAGCCCATAATGTTGAACACTGAAACATAATTGTTAACCTTAGGGTTTGGGTTT
TTTTTTGTTTTTTTTTTTTTGCATATACATATTATGTATTATTTCAATGAGTGAAGTTAA
AATGTATATACAATTTTGTAAGCTTTTATTTACTATATCATAATAATCTTTCTATGTCAT
TAAAGAATATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCATTGAGCCACCAGGGAACTCTACTTCTGTCTTTAAGGCTTTTGGTTTGCATTACCA
AGTTGACAATGATGCCGTTAGTAGCAATCCATACTACCATTAGCCGCATACATTTTGTGC
ATGCTCATTTACACCAAATTCTTACCAATACTGTGTATTGCATTTGAAGTAATCTGCCTC
TACTAACAGGCAAAAATGACATCTTTTTTTTTTTAATTGACATATAGTTGATGTAAAATA
GTATGTAAATTACACGTGTACAATATAGTGACTTTTAATTTTACAGGTTATACTCCATTT
ATAGTTATTATAAAATATTGGGTATATTCCCCATGTTGTACAATATAACCTTGTAGCATA
TTTTATACATAATAGTTTGTACTTCTTAGCCCCCTACCCATATGTTGCTCCTCCCCTCTT
CCTTCTTCCCATTTTGACAACCACTAGTTGGTTCTCTATGAGCCTGCTTCTTTGTTTGTT
GTTAGTTTGTTGTATTTTTTAGATTCCACATGTAAGTGATATCATGCGGTATTTGTCTTT
GTCTGACATATTTCACTTAGCATAATATCTTCCAAGTCCATCCATCTTGCTGCAAATGGC
AAAATTTCATTCTTTTTTATGCTGAGTAATATGACATTGTGTGTATGTGTGTGTGTATAT
AATCTTAACATCTTAATGAATTTTTAACTGTTCTTACTTTGCTTAGTAAAAAAGAAAGTA
AACAAAAAGCCCATAATGTTGAACACTGAAACATAATTGTTAACCTTAGGGTTTGGGTTT
TTTTTTGTTTTTTTTTTTTTGCATATACATATTATGTATTATTTCAATGAGTGAAGTTAA
AATGTATATACAATTTTGTAAGCTTTTATTTACTATATCATAATAATCTTTCTATGTCAT
TAAAGAATATTT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               160-640, gnl|bosTau2|chr1 (23041801-23041323)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               160-640, gnl|bosTau2|chr1 (23041801-23041323)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sug (0.127291)
               

               
               cbl (0.114797)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.127291)
               

               
               cbl (0.114797)
               

               
               jca (0.11396)