Non-Coding RNA Search

Ss1.1-Pig3-SRG8026B22.3

Sequence:


               
               CAGAAATGAGGTCGGAGAGACCCCGTGTGGGTTTAGGGGATGGCATAGAAGTTCCCCCCC
AGTACAAGCACAGTACCTGGACCCGAAAGAGAACCTTGGCAGTTCTTGTGCTTTTACTTT
GTAAACACTGTACAAATGTATTTGGAATTTTATTTGAAAAGAATTAAACTAGTTATTAAA
TTTTTTTCTTTCCTGTAAATATATATATTCAAACTCCATGTATCCAAACATTCCTTTAGC
GTGCGGATCGTAAGAGTGTCTTTATCGGCTGGAGGCCGCTGTCACTGGGCACGGCCCCAC
CTGCTGTAGTTGAAAGCACAGTGTGTGGAGTATTTGATGTACTGCAGTACCATCGTTATT
TTGGTCTGTTAAGTAAGTTGCAATTTGTGATGAAACGACGTGGAAAGTAGTGCTTCACAA
TGAACAGATTTCCTTGGTTACATGATTTTTTCTTGTAAAACTTTAAAAAAAAAGAAACTT
GAAATTTTATATATTTGGATTTTGTAGATTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAAATGAGGTCGGAGAGACCCCGTGTGGGTTTAGGGGATGGCATAGAAGTTCCCCCCC
AGTACAAGCACAGTACCTGGACCCGAAAGAGAACCTTGGCAGTTCTTGTGCTTTTACTTT
GTAAACACTGTACAAATGTATTTGGAATTTTATTTGAAAAGAATTAAACTAGTTATTAAA
TTTTTTTCTTTCCTGTAAATATATATATTCAAACTCCATGTATCCAAACATTCCTTTAGC
GTGCGGATCGTAAGAGTGTCTTTATCGGCTGGAGGCCGCTGTCACTGGGCACGGCCCCAC
CTGCTGTAGTTGAAAGCACAGTGTGTGGAGTATTTGATGTACTGCAGTACCATCGTTATT
TTGGTCTGTTAAGTAAGTTGCAATTTGTGATGAAACGACGTGGAAAGTAGTGCTTCACAA
TGAACAGATTTCCTTGGTTACATGATTTTTTCTTGTAAAACTTTAAAAAAAAAGAAACTT
GAAATTTTATATATTTGGATTTTGTAGATTTTTTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               56-516, gnl|bosTau2|chr14 (12006507-12006044)
               

               
               56-516, gnl|Hg17|chr8 (56616730-56617194)
               

               
               56-516, gnl|Mm7|chr1 (3197142-3196676)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               56-516, gnl|bosTau2|chr14 (12006507-12006044)
               

               
               56-516, gnl|Hg17|chr8 (56616730-56617194)
               

               
               56-516, gnl|Mm7|chr1 (3197142-3196676)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fce (0.271592)
               

               
               fcc (0.197785)
               

               
               fco (0.157208)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               fcc (0.197785)
               

               
               fco (0.157208)

	56-516, gnl\|bosTau2\|chr14 (12006507-12006044)
	56-516, gnl\|Hg17\|chr8 (56616730-56617194)
	56-516, gnl\|Mm7\|chr1 (3197142-3196676)