Ss1.1-Pig3-SRG8026F10.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACTGGGGAGAAACCCTTTGAATGTCCCAAGTGTGGAAAGTGTTACTTTCGGAAGGAGAA CCTCCTGGAGCATGAAGCCCGGAACTGCATGAACCGCTCGGAACAGGTCTTCACGTGCTC CGTGTGCCAGGAGACCTTCCGCCGGAGGATGGAGCTTCGGGTCCACGCAGTGTCCCACAC GGGGGAGATGCCCTACAAGTGCTCCTCCTGCGCCCAGCAGTTCATGCAGAAGAAGGACTT GCAGAGCCATATGATCAAGCTGCACGGAGCCCCCAAGCCCCACGCTTGTCCCACTTGTGC CAAGTGCTTCTTGTCCCGAACGGAACTGCAGCTGCACGAGGCTTTCAAGCATCGTGGGGA GAAGCTGTTTGTGTGCGAGGAGTGCGGGCACCGGGCTTCAAGCCGAAACGGCCTGCAGAT GCACATCAAGGCCAAGCACAGGAACGAGAGGCCGTATGTCTGTGAGTTCTGCAGCCACGC TTTCACCCAGAAGGCCAACCTCAACATGCACCTGCGCACGCACACGGGCGAGAAGCCCTT CCAGTGCCACCTCTGTGGCAAGACCTTCCGCACCCAAGCCAGCCTGGACAAGCACAACCG TGCGGACACTGGTGAGAGGCCCTTCAGCTGCGAGTTCTGCGAGCAGCGTTTCACGGAGAA GGGGCCCCTGCTGAGGCACGTGGCCAGCCGCCACCAGGAGGGCCGGCCCCACTTCTGCCA GATCTGCGGGAAGACCTTCAAAGCCGTGGAGCAGCTGCGCGTGCACGTGAGACGGCACAA GGGGGTCAGGAAGTTCGAGTGCACCGAGTGCGGCTACAAGTTCACTCGCCAGGCCCACCT GCGGAGGCACATGGAGATCCACGACCGGGTGGAGAACTACAACCCACGGCAGCGCAAGCT CCGGAACCTGGTCATTGAGGACGAGAAGATGGTGGTGGTGGCCCTCCAGCCGCCTGCTGA GCTGGAGGTGGGCTCGGCCGAGGTCATCGTGGAGTCACTGGCCCAGGGCAGCCTGGCCTC CCAGCTCCCTGGCCAGAGACTGTGTGCGGAGGAGAGCTTCACAGGCCCGGGCGTCATGGA GTCCTCGCTCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACTGGGGAGAAACCCTTTGAATGTCCCAAGTGTGGAAAGTGTTACTTTCGGAAGGAGAA CCTCCTGGAGCATGAAGCCCGGAACTGCATGAACCGCTCGGAACAGGTCTTCACGTGCTC CGTGTGCCAGGAGACCTTCCGCCGGAGGATGGAGCTTCGGGTCCACGCAGTGTCCCACAC GGGGGAGATGCCCTACAAGTGCTCCTCCTGCGCCCAGCAGTTCATGCAGAAGAAGGACTT GCAGAGCCATATGATCAAGCTGCACGGAGCCCCCAAGCCCCACGCTTGTCCCACTTGTGC CAAGTGCTTCTTGTCCCGAACGGAACTGCAGCTGCACGAGGCTTTCAAGCATCGTGGGGA GAAGCTGTTTGTGTGCGAGGAGTGCGGGCACCGGGCTTCAAGCCGAAACGGCCTGCAGAT GCACATCAAGGCCAAGCACAGGAACGAGAGGCCGTATGTCTGTGAGTTCTGCAGCCACGC TTTCACCCAGAAGGCCAACCTCAACATGCACCTGCGCACGCACACGGGCGAGAAGCCCTT CCAGTGCCACCTCTGTGGCAAGACCTTCCGCACCCAAGCCAGCCTGGACAAGCACAACCG TGCGGACACTGGTGAGAGGCCCTTCAGCTGCGAGTTCTGCGAGCAGCGTTTCACGGAGAA GGGGCCCCTGCTGAGGCACGTGGCCAGCCGCCACCAGGAGGGCCGGCCCCACTTCTGCCA GATCTGCGGGAAGACCTTCAAAGCCGTGGAGCAGCTGCGCGTGCACGTGAGACGGCACAA GGGGGTCAGGAAGTTCGAGTGCACCGAGTGCGGCTACAAGTTCACTCGCCAGGCCCACCT GCGGAGGCACATGGAGATCCACGACCGGGTGGAGAACTACAACCCACGGCAGCGCAAGCT CCGGAACCTGGTCATTGAGGACGAGAAGATGGTGGTGGTGGCCCTCCAGCCGCCTGCTGA GCTGGAGGTGGGCTCGGCCGAGGTCATCGTGGAGTCACTGGCCCAGGGCAGCCTGGCCTC CCAGCTCCCTGGCCAGAGACTGTGTGCGGAGGAGAGCTTCACAGGCCCGGGCGTCATGGA GTCCTCGCTCAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-108, gnl|bosTau2|chr16 (34612115-34612008) | |
| 1-108, gnl|canFam2|chr5 (63409109-63409232) | |
| 1-108, gnl|danRer3|chr2 (2039675-2039794) | |
| 1-108, gnl|dasNov1|scaffold_169576 (3595-3472) | |
| 1-108, gnl|echTel1|scaffold_223880 (4413-4536) | |
| 1-108, gnl|fr1|chrUn (133748625-133748723) | |
| 1-108, gnl|galGal2|chr21 (519591-519468) | |
| 1-108, gnl|hg17|chr1 (6580238-6580361) | |
| 1-108, gnl|Hg17|chr1 (6580251-6580358) | |
| 1-108, gnl|loxAfr1|scaffold_18373 (35296-35173) | |
| 1-108, gnl|mm7|chr4 (151012358-151012235) | |
| 1-108, gnl|Mm7|chr4 (151012343-151012236) | |
| 1-108, gnl|monDom2|scaffold_78 (1696514-1696391) | |
| 1-108, gnl|oryCun1|scaffold_180633 (912-789) | |
| 1-108, gnl|panTro1|chr1 (6538461-6538584) | |
| 1-108, gnl|rheMac2|chr1 (9604547-9604670) | |
| 1-108, gnl|rn3|chr5 (169260975-169260852) | |
| 1-108, gnl|tetNig1|chr9 (10031049-10031159) | |
| 1-108, gnl|xenTro1|scaffold_46 (1761168-1761303) | |
| 110-841, gnl|bosTau2|chr17 (44467367-44468086) | |
| 115-840, gnl|bosTau2|chr14 (3061389-3060676) | |
| 115-840, gnl|Hg17|chr8 (146078451-146077738) | |
| 356-653, gnl|bosTau2|chr13 (24162567-24162861) | |
| 356-653, gnl|Hg17|chr20 (18244291-18244585) | |
| 356-653, gnl|Mm7|chr5 (142277868-142278162) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-108, gnl|bosTau2|chr16 (34612115-34612008) | |
| 1-108, gnl|canFam2|chr5 (63409109-63409232) | |
| 1-108, gnl|danRer3|chr2 (2039675-2039794) | |
| 1-108, gnl|dasNov1|scaffold_169576 (3595-3472) | |
| 1-108, gnl|echTel1|scaffold_223880 (4413-4536) | |
| 1-108, gnl|fr1|chrUn (133748625-133748723) | |
| 1-108, gnl|galGal2|chr21 (519591-519468) | |
| 1-108, gnl|hg17|chr1 (6580238-6580361) | |
| 1-108, gnl|Hg17|chr1 (6580251-6580358) | |
| 1-108, gnl|loxAfr1|scaffold_18373 (35296-35173) | |
| 1-108, gnl|mm7|chr4 (151012358-151012235) | |
| 1-108, gnl|Mm7|chr4 (151012343-151012236) | |
| 1-108, gnl|monDom2|scaffold_78 (1696514-1696391) | |
| 1-108, gnl|oryCun1|scaffold_180633 (912-789) | |
| 1-108, gnl|panTro1|chr1 (6538461-6538584) | |
| 1-108, gnl|rheMac2|chr1 (9604547-9604670) | |
| 1-108, gnl|rn3|chr5 (169260975-169260852) | |
| 1-108, gnl|tetNig1|chr9 (10031049-10031159) | |
| 1-108, gnl|xenTro1|scaffold_46 (1761168-1761303) | |
| 110-841, gnl|bosTau2|chr17 (44467367-44468086) | |
| 115-840, gnl|bosTau2|chr14 (3061389-3060676) | |
| 115-840, gnl|Hg17|chr8 (146078451-146077738) | |
| 356-653, gnl|bosTau2|chr13 (24162567-24162861) | |
| 356-653, gnl|Hg17|chr20 (18244291-18244585) | |
| 356-653, gnl|Mm7|chr5 (142277868-142278162) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nco (0.161734) | |
| cly (0.120642) | |
| clu (0.119646) | |
| ecc (0.115035) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) | |
| cly (0.120642) | |
| clu (0.119646) | |
| ecc (0.115035) |