Non-Coding RNA Search

Ss1.1-Pig3-SRG8026G05.5

Sequence:


               
               ATTTTTTAATGATTTATTTGAAAGCATTGCGATTTGACCTGGGAAAGCACTGAAAACACC
TCTGATCTCCTCCTGTCTGATTAATCTCATGCCTACTCTCAGTGTTTACAAAGCACCACA
TATAACGTTATAAAACGGCCCAATGTCCTAGAGTAAGAGCAGAACAGCTCTGTCATATCT
TCGCACAAATTACAGCGAATCCAAAAGCCTTCATTAGTATCAGTTCCAGTGTGTCTCACT
GTGTAGCCACAAACTAAGAATGGTTTCTTTCCAGAAAGCTGCCTGAAATTTGGCTTTGTA
TTCTTCTAGGAAGAGCGTGAAGTCCTCAGGAGGAACTCTACTTTCTGAGCCAAACTACTA
AGTTTCCTGCAGAACCATCGAGAAAGTCATTCAAAAGACCCTGCAGTTGCACTTTCTTGG
AAAAGAATTTTTTTTTCATAGACTTTGAACATTTTGCCTATATTGTAAGGGTTTTGCATA
GATTTTATACTTGAGTAGACAACTTTAATAATCCATATGTATACTGTCGCAGCAGTGTGC
ATTTGGCAAACTTAAGACATTAGTACTTACTTAGCCCTGTTGCTACCAATAGTCTTTTGA
AAAAGATGCCAGTCCTTAATGTGGTAAATTAAGAATCCCATTTTGAATATAAATGCCAGT
CTGACGGAAACAGCAGCTTTATATAATTGGTGAGAGATGTGAGAATTAATTCTATTTTTT
GTCTTTTTAGGGCTGCACCCAGAGCATATGGAAGTTCCCAGGTTAGGGGTCACATCGGAG
CTGTGGCCACCGGCCTACACCACAACCACAGCCATGCCAGATCCCAGCCGAGTCTGCGAC
CTACACCACAGGCCACGGCAGTGCAGGATCCTTAACCCACTGAGCAAGGCCAGGGATAGA
ACCCGCATCCTCATGGATGCTAGTGGGGTTCATTAAAGCTAAGCCACCTCAGGAACTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTTTAATGATTTATTTGAAAGCATTGCGATTTGACCTGGGAAAGCACTGAAAACACC
TCTGATCTCCTCCTGTCTGATTAATCTCATGCCTACTCTCAGTGTTTACAAAGCACCACA
TATAACGTTATAAAACGGCCCAATGTCCTAGAGTAAGAGCAGAACAGCTCTGTCATATCT
TCGCACAAATTACAGCGAATCCAAAAGCCTTCATTAGTATCAGTTCCAGTGTGTCTCACT
GTGTAGCCACAAACTAAGAATGGTTTCTTTCCAGAAAGCTGCCTGAAATTTGGCTTTGTA
TTCTTCTAGGAAGAGCGTGAAGTCCTCAGGAGGAACTCTACTTTCTGAGCCAAACTACTA
AGTTTCCTGCAGAACCATCGAGAAAGTCATTCAAAAGACCCTGCAGTTGCACTTTCTTGG
AAAAGAATTTTTTTTTCATAGACTTTGAACATTTTGCCTATATTGTAAGGGTTTTGCATA
GATTTTATACTTGAGTAGACAACTTTAATAATCCATATGTATACTGTCGCAGCAGTGTGC
ATTTGGCAAACTTAAGACATTAGTACTTACTTAGCCCTGTTGCTACCAATAGTCTTTTGA
AAAAGATGCCAGTCCTTAATGTGGTAAATTAAGAATCCCATTTTGAATATAAATGCCAGT
CTGACGGAAACAGCAGCTTTATATAATTGGTGAGAGATGTGAGAATTAATTCTATTTTTT
GTCTTTTTAGGGCTGCACCCAGAGCATATGGAAGTTCCCAGGTTAGGGGTCACATCGGAG
CTGTGGCCACCGGCCTACACCACAACCACAGCCATGCCAGATCCCAGCCGAGTCTGCGAC
CTACACCACAGGCCACGGCAGTGCAGGATCCTTAACCCACTGAGCAAGGCCAGGGATAGA
ACCCGCATCCTCATGGATGCTAGTGGGGTTCATTAAAGCTAAGCCACCTCAGGAACTCCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               4-709, gnl|bosTau2|chr26 (26062805-26062080)
               

               
               4-709, gnl|Hg17|chr10 (120886256-120886967)
               

               
               4-709, gnl|Mm7|chr19 (60757808-60758540)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-709, gnl|bosTau2|chr26 (26062805-26062080)
               

               
               4-709, gnl|Hg17|chr10 (120886256-120886967)
               

               
               4-709, gnl|Mm7|chr19 (60757808-60758540)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               clu (0.598229)
               

               
               lyg (0.266205)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.598229)
               

               
               lyg (0.266205)

	4-709, gnl\|bosTau2\|chr26 (26062805-26062080)
	4-709, gnl\|Hg17\|chr10 (120886256-120886967)
	4-709, gnl\|Mm7\|chr19 (60757808-60758540)