Ss1.1-Pig3-SRG8026H08.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTGCTGACCGGATCGCGGCTGCCCGCCAGCGTGTCCGCCGCGCCGCCGCCAGCATGGGC TGCGCCCCGAGCATCCACATTTCCGAGAACCGGGCGGTGTACCACGGCGGCAAGGAGGCC GAGGACGCGCCGGGCCCCGCGGCGCCGCCGCCGCTGCCGCCCGGCGGGCCGCGCTTCCCA CACGGCCCGAAGACCGCCGCCTCGGCCCGGGCCCGAGGCGCCAGCCTCGCGGAGTCCGAG CCTCGCGGCAGCGGCGGCAACCAGGTAGCAATAGCTGATGTGCAATTTGGCCCCATGAGA TTTCATCCAGATCAACTTCAGGTACTTTTAGTGTTTACCAAAGAAGATAACCAGTGTAAT GGATTCTGTAGGGCATGTGAAAAAGCAGGGTTTAAGTGTACAGTTACCAAGGAGGCTCAT ACTGTCCTTGCCTGTTTCCTGGACAAACATCACGACATCATCATCATAGACCACAGAAAT CCCCGGCAGCTGGATGCAGAGGCGCTGTGCAGGTCTATCAGATCATCAAAACTGTCAGAA AACACAGTTATTATTGGTGTAGTACGAAGGGTGGATAGAGATGAGTCATCTGTAATGTCC CTCATTGCTGCTGGCTTTACAAGGGCTCTGCTACTGACATGCAGACACCAAAAATCCTCT TCAAGGCATTGAAAGAAAAGTAGCCCTAAGCCCTCTTCTTTTCTAATTCCATTTATTTAA TTATTGAGATACCATTCATATATCATGATGTGGTTCCACTATTTTATTTTAAACTTGATG TAATATTATTTTAATAAAAGATAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTGCTGACCGGATCGCGGCTGCCCGCCAGCGTGTCCGCCGCGCCGCCGCCAGCATGGGC TGCGCCCCGAGCATCCACATTTCCGAGAACCGGGCGGTGTACCACGGCGGCAAGGAGGCC GAGGACGCGCCGGGCCCCGCGGCGCCGCCGCCGCTGCCGCCCGGCGGGCCGCGCTTCCCA CACGGCCCGAAGACCGCCGCCTCGGCCCGGGCCCGAGGCGCCAGCCTCGCGGAGTCCGAG CCTCGCGGCAGCGGCGGCAACCAGGTAGCAATAGCTGATGTGCAATTTGGCCCCATGAGA TTTCATCCAGATCAACTTCAGGTACTTTTAGTGTTTACCAAAGAAGATAACCAGTGTAAT GGATTCTGTAGGGCATGTGAAAAAGCAGGGTTTAAGTGTACAGTTACCAAGGAGGCTCAT ACTGTCCTTGCCTGTTTCCTGGACAAACATCACGACATCATCATCATAGACCACAGAAAT CCCCGGCAGCTGGATGCAGAGGCGCTGTGCAGGTCTATCAGATCATCAAAACTGTCAGAA AACACAGTTATTATTGGTGTAGTACGAAGGGTGGATAGAGATGAGTCATCTGTAATGTCC CTCATTGCTGCTGGCTTTACAAGGGCTCTGCTACTGACATGCAGACACCAAAAATCCTCT TCAAGGCATTGAAAGAAAAGTAGCCCTAAGCCCTCTTCTTTTCTAATTCCATTTATTTAA TTATTGAGATACCATTCATATATCATGATGTGGTTCCACTATTTTATTTTAAACTTGATG TAATATTATTTTAATAAAAGATAT |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-267, gnl|bosTau2|chr21 (13026212-13026475) | |
| 1-267, gnl|Hg17|chr15 (83326344-83326585) | |
| 1-267, gnl|Mm7|chr7 (77085301-77085533) | |
| 317-514, gnl|bosTau2|chr21 (13101948-13102145) | |
| 317-514, gnl|canFam2|chr3 (57149873-57150107) | |
| 317-514, gnl|danRer3|chr2 (32397093-32396878) | |
| 317-514, gnl|dasNov1|scaffold_14456 (27953-27719) | |
| 317-514, gnl|echTel1|scaffold_302269 (3717-3930) | |
| 317-514, gnl|fr1|chrUn (66204828-66205043) | |
| 317-514, gnl|galGal2|chr10 (11616194-11616430) | |
| 317-514, gnl|hg17|chr15 (83411223-83411457) | |
| 317-514, gnl|Hg17|chr15 (83411244-83411441) | |
| 317-514, gnl|loxAfr1|scaffold_56951 (1570-1336) | |
| 317-514, gnl|mm7|chr7 (77155248-77155480) | |
| 317-514, gnl|Mm7|chr7 (77155269-77155466) | |
| 317-514, gnl|monDom2|scaffold_45 (1232971-1233205) | |
| 317-514, gnl|oryCun1|scaffold_97235 (739-981) | |
| 317-514, gnl|panTro1|chr16 (84217634-84217868) | |
| 317-514, gnl|rheMac2|chr7 (64199552-64199318) | |
| 317-514, gnl|rn3|chr1 (137566486-137566718) | |
| 317-514, gnl|tetNig1|chr5 (9538329-9538540) | |
| 317-514, gnl|xenTro1|scaffold_613 (437412-437194) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-267, gnl|bosTau2|chr21 (13026212-13026475) | |
| 1-267, gnl|Hg17|chr15 (83326344-83326585) | |
| 1-267, gnl|Mm7|chr7 (77085301-77085533) | |
| 317-514, gnl|bosTau2|chr21 (13101948-13102145) | |
| 317-514, gnl|canFam2|chr3 (57149873-57150107) | |
| 317-514, gnl|danRer3|chr2 (32397093-32396878) | |
| 317-514, gnl|dasNov1|scaffold_14456 (27953-27719) | |
| 317-514, gnl|echTel1|scaffold_302269 (3717-3930) | |
| 317-514, gnl|fr1|chrUn (66204828-66205043) | |
| 317-514, gnl|galGal2|chr10 (11616194-11616430) | |
| 317-514, gnl|hg17|chr15 (83411223-83411457) | |
| 317-514, gnl|Hg17|chr15 (83411244-83411441) | |
| 317-514, gnl|loxAfr1|scaffold_56951 (1570-1336) | |
| 317-514, gnl|mm7|chr7 (77155248-77155480) | |
| 317-514, gnl|Mm7|chr7 (77155269-77155466) | |
| 317-514, gnl|monDom2|scaffold_45 (1232971-1233205) | |
| 317-514, gnl|oryCun1|scaffold_97235 (739-981) | |
| 317-514, gnl|panTro1|chr16 (84217634-84217868) | |
| 317-514, gnl|rheMac2|chr7 (64199552-64199318) | |
| 317-514, gnl|rn3|chr1 (137566486-137566718) | |
| 317-514, gnl|tetNig1|chr5 (9538329-9538540) | |
| 317-514, gnl|xenTro1|scaffold_613 (437412-437194) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| cte (0.29274) | |
| mas (0.210305) | |
| hea (0.204499) | |
| eye (0.170503) | |
| ste (0.135208) | |
| eep (0.122564) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| mas (0.210305) | |
| hea (0.204499) | |
| eye (0.170503) | |
| ste (0.135208) | |
| eep (0.122564) |