Non-Coding RNA Search

Ss1.1-Pig3-SRG8026N15.5

Sequence:


               
               TGAGAACTCACCCCCTTTCTATTGTTATTTCGTAGGAGGAAGAAATAGGGCAACCATGAG
ACCTGGCTGGAGGGTGATTGATGGTTTATTTGTTCACAGGCTGAGGCAACGTGGGTCAGT
GTGTGTCCCCCTCATGAATCTAGGCAGAGTGGCCCTCCTTGCTTGCGGATGACAGGTACT
GGTTCTTATTCCTGAAGGGCCTGCGGCATAAAGCCTTACAGAGAAACACACACGGAGGGG
AAAACTGTCAAACCTTGAACACTGTTATTTATATTTTTAACAATGAAAAAAGATCATTGT
CAGTGTGCTAACCATTTATTTGCTCCTCCCTCTTGTGTTGGATGTAGACAAAGTTACGTT
TGAGCTGTTTTGTGAGACCCTTAATGAAATGAAGAATTCCAAAGACAGTCACATTACGTG
TGGGGACTTTTTTTTCCGTAAATACAGACTGAGTAGCCCTTCTACGCTTGTGTTCAGCCG
AGCGTGGGGGATGCCCTGCTGCCACCGCTGCCCGACTCACCGCCTTCCTCCTGCAACAAC
CGCCTTCCCAGGAAGAATGCGTCATGCACCGTGGTTACCACGTCATTTCGAGGGGTTCCT
GTCACTATCACGGGGGTGGAGAGAAAGCTGAATTTTATTCACAAGGACAACTCTCCAACC
TCTTGACAAGGGGAGGAGGCCAGGACCCAACTCCATTTGAAACGGAACTCATGTGTCCTA
CTGTATGAGATTTGACCTGACACTGGCTTCTGCAGTGAGATACATTATCAGGCTGTTTTA
TGGATGCTTTTCAAAGTTTCTTTTCCCAAACTGTCAAACTTAACCACACTTTTATTAAAG
ACTCCCTCCTTAATATCCGCGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGAACTCACCCCCTTTCTATTGTTATTTCGTAGGAGGAAGAAATAGGGCAACCATGAG
ACCTGGCTGGAGGGTGATTGATGGTTTATTTGTTCACAGGCTGAGGCAACGTGGGTCAGT
GTGTGTCCCCCTCATGAATCTAGGCAGAGTGGCCCTCCTTGCTTGCGGATGACAGGTACT
GGTTCTTATTCCTGAAGGGCCTGCGGCATAAAGCCTTACAGAGAAACACACACGGAGGGG
AAAACTGTCAAACCTTGAACACTGTTATTTATATTTTTAACAATGAAAAAAGATCATTGT
CAGTGTGCTAACCATTTATTTGCTCCTCCCTCTTGTGTTGGATGTAGACAAAGTTACGTT
TGAGCTGTTTTGTGAGACCCTTAATGAAATGAAGAATTCCAAAGACAGTCACATTACGTG
TGGGGACTTTTTTTTCCGTAAATACAGACTGAGTAGCCCTTCTACGCTTGTGTTCAGCCG
AGCGTGGGGGATGCCCTGCTGCCACCGCTGCCCGACTCACCGCCTTCCTCCTGCAACAAC
CGCCTTCCCAGGAAGAATGCGTCATGCACCGTGGTTACCACGTCATTTCGAGGGGTTCCT
GTCACTATCACGGGGGTGGAGAGAAAGCTGAATTTTATTCACAAGGACAACTCTCCAACC
TCTTGACAAGGGGAGGAGGCCAGGACCCAACTCCATTTGAAACGGAACTCATGTGTCCTA
CTGTATGAGATTTGACCTGACACTGGCTTCTGCAGTGAGATACATTATCAGGCTGTTTTA
TGGATGCTTTTCAAAGTTTCTTTTCCCAAACTGTCAAACTTAACCACACTTTTATTAAAG
ACTCCCTCCTTAATATCCGCGAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-853, gnl|bosTau2|chr6 (47964740-47965611)
               

               
               1-853, gnl|Hg17|chr4 (78057710-78058553)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-853, gnl|bosTau2|chr6 (47964740-47965611)
               

               
               1-853, gnl|Hg17|chr4 (78057710-78058553)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               cst (0.140036)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               cst (0.140036)

	1-853, gnl\|bosTau2\|chr6 (47964740-47965611)
	1-853, gnl\|Hg17\|chr4 (78057710-78058553)