Ss1.1-Pig3-SRG8026N20.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAGATCTGCGGCTTCGATGTTCTCTACCCGCCTGAGCGCTACGGCCACGTGCTGAGTGG CTGGATCTGTGGGGAGGAGGCGCTGGTCATGGAGAAGTGCGACGACGAGGCGGTGGCCGA GATCTGCACGGAGATGCTGCGGCAGTTCACGGGGAATCCCAACATTCCAAAGCCTCGGCG AATCCTGCGCTCGGCCTGGGGCAGCAATCCCTACTTCCGGGGCTCCTATTCGTACACACA GGTGGGCTCAAGTGGGGCCGATGTGGAGAAGCTGGCCAAGCCCCTGCCGTACACTGAGAG CTCCAAGACAGCGCCCATGCAGGTGCTGTTCTCGGGTGAGGCCACCCACCGCAAGTACTA TTCCACCACCCATGGTGCTCTGCTTTCTGGCCAGCGTGAGGCTGCCCGTCTCATTGAGAT GTACCAAGACCTCTTCCAGCAGGGGACCTGAAGGCCTCCTTGCTGCCGAGCGTGTTCCTT AAAGAACCACTAACTCGTGACTGCCAGCCCTGCCCCTTGCTGCTGTGTATGCCTCGTTTC CTAATCCTCTGTAGAATGGATTTGTATCTTTTGTAGAGCTAGACACCTGACTGGCTTCAG ACCTGGCCCTGTAGCTTTTCCTTTTCTCCGTGCTGGGTGGTGACCAAGGTGGGGTCCATT GATTTACCTCTGTGCTCTGACCTCTGACCTCCCCCCATGCCTCCCCTCATCTCTGGCCTT GTTATTGTAAGTGCCTTCAATACTTTGCATTTTGGGATAATAAAAGAGGCTTGCCCTTCC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAGATCTGCGGCTTCGATGTTCTCTACCCGCCTGAGCGCTACGGCCACGTGCTGAGTGG CTGGATCTGTGGGGAGGAGGCGCTGGTCATGGAGAAGTGCGACGACGAGGCGGTGGCCGA GATCTGCACGGAGATGCTGCGGCAGTTCACGGGGAATCCCAACATTCCAAAGCCTCGGCG AATCCTGCGCTCGGCCTGGGGCAGCAATCCCTACTTCCGGGGCTCCTATTCGTACACACA GGTGGGCTCAAGTGGGGCCGATGTGGAGAAGCTGGCCAAGCCCCTGCCGTACACTGAGAG CTCCAAGACAGCGCCCATGCAGGTGCTGTTCTCGGGTGAGGCCACCCACCGCAAGTACTA TTCCACCACCCATGGTGCTCTGCTTTCTGGCCAGCGTGAGGCTGCCCGTCTCATTGAGAT GTACCAAGACCTCTTCCAGCAGGGGACCTGAAGGCCTCCTTGCTGCCGAGCGTGTTCCTT AAAGAACCACTAACTCGTGACTGCCAGCCCTGCCCCTTGCTGCTGTGTATGCCTCGTTTC CTAATCCTCTGTAGAATGGATTTGTATCTTTTGTAGAGCTAGACACCTGACTGGCTTCAG ACCTGGCCCTGTAGCTTTTCCTTTTCTCCGTGCTGGGTGGTGACCAAGGTGGGGTCCATT GATTTACCTCTGTGCTCTGACCTCTGACCTCCCCCCATGCCTCCCCTCATCTCTGGCCTT GTTATTGTAAGTGCCTTCAATACTTTGCATTTTGGGATAATAAAAGAGGCTTGCCCTTCC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-153, gnl|bosTau2|chr13 (34990463-34990311) | |
| 1-153, gnl|canFam2|chr24 (20254115-20253778) | |
| 1-153, gnl|danRer3|chr1 (39443369-39443032) | |
| 1-153, gnl|echTel1|scaffold_303400 (55980-55643) | |
| 1-153, gnl|fr1|chrUn (291848146-291847809) | |
| 1-153, gnl|galGal2|chr4 (88403359-88403022) | |
| 1-153, gnl|hg17|chr20 (4111127-4111464) | |
| 1-153, gnl|Hg17|chr20 (4111344-4111496) | |
| 1-153, gnl|loxAfr1|scaffold_25688 (27769-28106) | |
| 1-153, gnl|mm7|chr2 (131261656-131261993) | |
| 1-153, gnl|Mm7|chr2 (131261873-131262025) | |
| 1-153, gnl|monDom2|scaffold_68 (536002-536339) | |
| 1-153, gnl|oryCun1|scaffold_212198 (123444-123107) | |
| 1-153, gnl|panTro1|chr21 (4068804-4069141) | |
| 1-153, gnl|rheMac2|chr9 (133019883-133020212) | |
| 1-153, gnl|rn3|chr3 (119155503-119155840) | |
| 1-153, gnl|tetNig1|chr18 (5648787-5649124) | |
| 1-153, gnl|xenTro1|scaffold_366 (1167324-1167661) | |
| 313-780, gnl|bosTau2|chr13 (34987056-34986591) | |
| 313-780, gnl|Hg17|chr20 (4115916-4116363) | |
| 313-780, gnl|Mm7|chr2 (131265595-131266020) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-153, gnl|bosTau2|chr13 (34990463-34990311) | |
| 1-153, gnl|canFam2|chr24 (20254115-20253778) | |
| 1-153, gnl|danRer3|chr1 (39443369-39443032) | |
| 1-153, gnl|echTel1|scaffold_303400 (55980-55643) | |
| 1-153, gnl|fr1|chrUn (291848146-291847809) | |
| 1-153, gnl|galGal2|chr4 (88403359-88403022) | |
| 1-153, gnl|hg17|chr20 (4111127-4111464) | |
| 1-153, gnl|Hg17|chr20 (4111344-4111496) | |
| 1-153, gnl|loxAfr1|scaffold_25688 (27769-28106) | |
| 1-153, gnl|mm7|chr2 (131261656-131261993) | |
| 1-153, gnl|Mm7|chr2 (131261873-131262025) | |
| 1-153, gnl|monDom2|scaffold_68 (536002-536339) | |
| 1-153, gnl|oryCun1|scaffold_212198 (123444-123107) | |
| 1-153, gnl|panTro1|chr21 (4068804-4069141) | |
| 1-153, gnl|rheMac2|chr9 (133019883-133020212) | |
| 1-153, gnl|rn3|chr3 (119155503-119155840) | |
| 1-153, gnl|tetNig1|chr18 (5648787-5649124) | |
| 1-153, gnl|xenTro1|scaffold_366 (1167324-1167661) | |
| 313-780, gnl|bosTau2|chr13 (34987056-34986591) | |
| 313-780, gnl|Hg17|chr20 (4115916-4116363) | |
| 313-780, gnl|Mm7|chr2 (131265595-131266020) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| gul (0.177588) | |
| hyp (0.142837) | |
| nbm (0.0993246) |