Non-Coding RNA Search

Ss1.1-Pig3-SRG8027G18.5

Sequence:


               
               CATGTAAAGAGGTAGTTGTCTATACTTTGGGAAAACAAGCAATGTTGCCTATTTTAACCC
CAGGATATACAGTTATGAACCAATCAGACTAAGCCCTGACCATTTCCAGCATTCTGTCTA
GATGGGGTGGGTTCTGGCTTAATTGAAATAGAGATATGGAGAAATACATATTTATTTAAA
GATAATAAAATTAATTAGCATTTGAGTTTGTGTAAAGATAAGGTAATTGAGATAAAGCAA
CTAACAGTATGTTAACGAGGTTAAAAATAATACTTTGCAGTATTGTAACCTCTTTTTGGC
ATTTGAGTTTATGGATAGCATTAAAAGGCCTTAATTTTTCACTTTTGCTGGGAAAGGTAC
ATTTGCTTAGACTGTTCATTTAGAGTAGTGTTCTTTTTTTTTTTTGTCTTTTGTCTTTTT
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------AATTCCTAGAGT
ATTTTAACGTAATATTACTGTGAAAAGCATTCCATCACATATTCATGAGCAAATTGCTAC
ACATTTTAAAAATTGTGCTTTACAACTTAGTACAAATATTTTAGGCCTCAGTCTTCAAAT
CACTGAGATTTTAAATTTGGCAATGGATATGAAATTACTTTCAGTCTTACAGAATGAGTA
TATTGTTAAAATGCTTGTTAACATCGGAGGAGAGGTGGAGTTTCCATCTGGTTGGCGTTA
ATGTGTTAAATTTTTTTTACTTATTTTGAGAGTGGAAGAGGAAATCNTATTCATGCAATT
AAATTAGTAAAATTATACTCTAAAGAAAGTTTTTTAGTTGGTAAAATTTGGCATTACTGG
GCTTAAATTTTGGCCTCATACTCATTTACAATATATATTAACACATTTGAGTATGAAGTG
AAATAGTCTTAAATATGAGGTATGAGGCACCTGCATATAAATGAAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGTAAAGAGGTAGTTGTCTATACTTTGGGAAAACAAGCAATGTTGCCTATTTTAACCC
CAGGATATACAGTTATGAACCAATCAGACTAAGCCCTGACCATTTCCAGCATTCTGTCTA
GATGGGGTGGGTTCTGGCTTAATTGAAATAGAGATATGGAGAAATACATATTTATTTAAA
GATAATAAAATTAATTAGCATTTGAGTTTGTGTAAAGATAAGGTAATTGAGATAAAGCAA
CTAACAGTATGTTAACGAGGTTAAAAATAATACTTTGCAGTATTGTAACCTCTTTTTGGC
ATTTGAGTTTATGGATAGCATTAAAAGGCCTTAATTTTTCACTTTTGCTGGGAAAGGTAC
ATTTGCTTAGACTGTTCATTTAGAGTAGTGTTCTTTTTTTTTTTTGTCTTTTGTCTTTTT
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------AATTCCTAGAGT
ATTTTAACGTAATATTACTGTGAAAAGCATTCCATCACATATTCATGAGCAAATTGCTAC
ACATTTTAAAAATTGTGCTTTACAACTTAGTACAAATATTTTAGGCCTCAGTCTTCAAAT
CACTGAGATTTTAAATTTGGCAATGGATATGAAATTACTTTCAGTCTTACAGAATGAGTA
TATTGTTAAAATGCTTGTTAACATCGGAGGAGAGGTGGAGTTTCCATCTGGTTGGCGTTA
ATGTGTTAAATTTTTTTTACTTATTTTGAGAGTGGAAGAGGAAATCNTATTCATGCAATT
AAATTAGTAAAATTATACTCTAAAGAAAGTTTTTTAGTTGGTAAAATTTGGCATTACTGG
GCTTAAATTTTGGCCTCATACTCATTTACAATATATATTAACACATTTGAGTATGAAGTG
AAATAGTCTTAAATATGAGGTATGAGGCACCTGCATATAAATGAAAAC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               52-392, gnl|bosTau2|chr26 (245093-245435)
               

               
               52-392, gnl|Mm7|chr10 (70987054-70987381)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               52-392, gnl|bosTau2|chr26 (245093-245435)
               

               
               52-392, gnl|Mm7|chr10 (70987054-70987381)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               cbl (0.114797)
               

               
               jca (0.11396)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)
               

               
               jca (0.11396)

	52-392, gnl\|bosTau2\|chr26 (245093-245435)
	52-392, gnl\|Mm7\|chr10 (70987054-70987381)