Non-Coding RNA Search

Ss1.1-Pig3-SRG8027I11.3

Sequence:


               
               TTCATTTTATTTGAGGTATGGGATACGCCTTTTCACATTTACTTTTCTATCTACATTGCT
GGCTTTATTGCCTTACTTAGGCCAGCAGAGGGCAACCTAGCTGGCAGAAAGAGCTAGGCA
GTTTGGTTTTACATTTTTGCCAGAAGATAATAGCTGTTCCTGCTAATTTCTAACAAACAC
CTAGTCAAGAGGGTACATATGCTGACACAGTGGAAGACTGCTTTAAAGAAAATATGTGGT
TTAGGTTTGTTTTAGTGGGAAACAGAAGGAATTTTATAAATTCTGGGCAGATGAGTCATC
CAGCTCTTTTCAGTCCTTTCATTTAATGATTGTTGAGTCCCAGGGATTATAACTGTGTTA
TTCTCTCTCTTACTTGTGCAGTGTCAAAAGCACTCTATGAGTAAATTTGGTAGCATCTCT
CGGTTTTATATATTTTTCAACTTGAAAATGCCCAAGGAATAATTGGAAAGTAGCTAGATT
TTATGTGTATTTCATGCCATGATTGAAAGTACCATTTTTACTGATGCTATTAAACTAATA
ATTGCTTTAAGTAAGGTTTAACTTTTTTTTCGTTCTGTATCATATTTGTAATGCAACATT
TTAAAAAATCCATAAATTGAGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCATTTTATTTGAGGTATGGGATACGCCTTTTCACATTTACTTTTCTATCTACATTGCT
GGCTTTATTGCCTTACTTAGGCCAGCAGAGGGCAACCTAGCTGGCAGAAAGAGCTAGGCA
GTTTGGTTTTACATTTTTGCCAGAAGATAATAGCTGTTCCTGCTAATTTCTAACAAACAC
CTAGTCAAGAGGGTACATATGCTGACACAGTGGAAGACTGCTTTAAAGAAAATATGTGGT
TTAGGTTTGTTTTAGTGGGAAACAGAAGGAATTTTATAAATTCTGGGCAGATGAGTCATC
CAGCTCTTTTCAGTCCTTTCATTTAATGATTGTTGAGTCCCAGGGATTATAACTGTGTTA
TTCTCTCTCTTACTTGTGCAGTGTCAAAAGCACTCTATGAGTAAATTTGGTAGCATCTCT
CGGTTTTATATATTTTTCAACTTGAAAATGCCCAAGGAATAATTGGAAAGTAGCTAGATT
TTATGTGTATTTCATGCCATGATTGAAAGTACCATTTTTACTGATGCTATTAAACTAATA
ATTGCTTTAAGTAAGGTTTAACTTTTTTTTCGTTCTGTATCATATTTGTAATGCAACATT
TTAAAAAATCCATAAATTGAGTGG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               58-624, gnl|bosTau2|chr14 (12597289-12596720)
               

               
               58-624, gnl|Hg17|chr5 (115194971-115194413)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-624, gnl|bosTau2|chr14 (12597289-12596720)
               

               
               58-624, gnl|Hg17|chr5 (115194971-115194413)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cbe (0.239234)
               

               
               fhi (0.169578)
               

               
               lnt (0.142308)
               

               
               thg (0.126791)
               

               
               tra (0.123092)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               fhi (0.169578)
               

               
               lnt (0.142308)
               

               
               thg (0.126791)
               

               
               tra (0.123092)

	58-624, gnl\|bosTau2\|chr14 (12597289-12596720)
	58-624, gnl\|Hg17\|chr5 (115194971-115194413)

	cbe (0.239234)
	fhi (0.169578)
	lnt (0.142308)
	thg (0.126791)
	tra (0.123092)