Non-Coding RNA Search

Ss1.1-Pig3-SRG8027J04.3

Sequence:


               
               CACCCACCTTCACAGTGAGCATGTCCAGTGTTAGAACAGTGCCTTCCGGAATTTTCACTT
TGGCCACCACAGACTTGCCCAGCTGTGGATAAAATTAAGACTCAGTGCCAGCCTCACAGA
AGTAACTAGCACACAATGCTTTATCCCCTGATCAGTTTTCTTGCACAAGGTACCTTGAGA
ACAGAGACTCAGTTTTCCCCTTTGGTGCTAGAAAAGTATCTCACACACAGCAGGGGCTCG
GCCAGTGTTGTGGACTCAGAGACTCAGAGGAGCCTTTACAATAAAGGGCTCAGGATATGG
AGCCAAAGCAAACCAGATCCGAATCCCAGTAAGCCAAGACTGAGCTTCCCTGTAAAATGG
GAAGTAAGAGTGCCTCCATCTTGTCAGACGACTATAAGGATTAGTAATAATGTGTGTAAT
CTACCTGGAATAGAGAATGCTCGCAATAAATAAAGATTATGATTACTTAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCCACCTTCACAGTGAGCATGTCCAGTGTTAGAACAGTGCCTTCCGGAATTTTCACTT
TGGCCACCACAGACTTGCCCAGCTGTGGATAAAATTAAGACTCAGTGCCAGCCTCACAGA
AGTAACTAGCACACAATGCTTTATCCCCTGATCAGTTTTCTTGCACAAGGTACCTTGAGA
ACAGAGACTCAGTTTTCCCCTTTGGTGCTAGAAAAGTATCTCACACACAGCAGGGGCTCG
GCCAGTGTTGTGGACTCAGAGACTCAGAGGAGCCTTTACAATAAAGGGCTCAGGATATGG
AGCCAAAGCAAACCAGATCCGAATCCCAGTAAGCCAAGACTGAGCTTCCCTGTAAAATGG
GAAGTAAGAGTGCCTCCATCTTGTCAGACGACTATAAGGATTAGTAATAATGTGTGTAAT
CTACCTGGAATAGAGAATGCTCGCAATAAATAAAGATTATGATTACTTAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-468, gnl|bosTau2|chr8 (33236570-33236095)
               

               
               1-468, gnl|Hg17|chr9 (97924764-97924276)
               

               
               1-468, gnl|Mm7|chr4 (46516330-46515882)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-468, gnl|bosTau2|chr8 (33236570-33236095)
               

               
               1-468, gnl|Hg17|chr9 (97924764-97924276)
               

               
               1-468, gnl|Mm7|chr4 (46516330-46515882)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               col (0.195008)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               spl (0.143184)

	1-468, gnl\|bosTau2\|chr8 (33236570-33236095)
	1-468, gnl\|Hg17\|chr9 (97924764-97924276)
	1-468, gnl\|Mm7\|chr4 (46516330-46515882)