Non-Coding RNA Search

Ss1.1-Pig3-SRG8028A14.3

Sequence:


               
               CTGAGGGGAAAATCGTGGAGTTGATCAAGAAGCTTTTTCCTCCGACCGTGGCCGTCCTGG
TGAATTACATTTACTTTAAAGCCCAGTGGATGACACACTTTGATACCAACCTCACTACGG
AGGCAGATTTCTACGTGAGCAAGAACAGTACGGTGAGGGTGCCCATGATGGGCATTAAGA
ACCTGACCGTGCCATACTTCCGGGACGAGGAGCTGGCCTGCACGGTAGTGGAGCTCCCGT
ACACCAGCAACGACAGCACGCTCTTCATCCTCCCTGACGACGGCAGGATGGCGGCCGTGG
AAGCCAATCTGCTCCCGGAGACGCTGAGAAGGTGGAGAGACTACCTGCAGCCCAGGCGGA
TAGATGCCCTCCACCTGCCACGGTTTTCCATCTCCAGCGACTATAAACTGGAGGAGATCC
TTCCCCGGCTGGGCATCAAGAAAATCTTCAGTGTGAAGGCTAACCTGTCAGGAATCACAG
ATACAACACCCTTGTATGTTTCCCAGGTGGCCCACAGCGCCGTGCTGGACGTGGATGAGG
AGGGCACGGAAGGAGCCGCGTCCACAGGAGTCGTCATAGAAAGGAAGTCCTTTGAGAATT
TCATTGTGCGATTTGACAGCCCCTTTCTGTTCGCCACGGTCCTCAGAGACACCCAGAGCA
TCATCTTTCTGGGCAAAGTCGTCAACCCCCATCCAGCCTAGAGCTCCCCTCTGACCCGTG
GGGCTTCTCGCTAAGGAGCTGGGTGCTCTGGGCTCTGGGGCAGCCTGGCCTCTACTCAGC
CATGAGCTGCCTCACCTTGCCTGTTCCCACTCACCCTTGGAAGGTGACAGTCACCTTCTG
GTGGCTCCACACACACAGGAGTCTGTGCCCTGCTCCGCGGAGGCTCTGAGACCTCCCACA
GCAATAAAGCATCTTTCTGAGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGAGGGGAAAATCGTGGAGTTGATCAAGAAGCTTTTTCCTCCGACCGTGGCCGTCCTGG
TGAATTACATTTACTTTAAAGCCCAGTGGATGACACACTTTGATACCAACCTCACTACGG
AGGCAGATTTCTACGTGAGCAAGAACAGTACGGTGAGGGTGCCCATGATGGGCATTAAGA
ACCTGACCGTGCCATACTTCCGGGACGAGGAGCTGGCCTGCACGGTAGTGGAGCTCCCGT
ACACCAGCAACGACAGCACGCTCTTCATCCTCCCTGACGACGGCAGGATGGCGGCCGTGG
AAGCCAATCTGCTCCCGGAGACGCTGAGAAGGTGGAGAGACTACCTGCAGCCCAGGCGGA
TAGATGCCCTCCACCTGCCACGGTTTTCCATCTCCAGCGACTATAAACTGGAGGAGATCC
TTCCCCGGCTGGGCATCAAGAAAATCTTCAGTGTGAAGGCTAACCTGTCAGGAATCACAG
ATACAACACCCTTGTATGTTTCCCAGGTGGCCCACAGCGCCGTGCTGGACGTGGATGAGG
AGGGCACGGAAGGAGCCGCGTCCACAGGAGTCGTCATAGAAAGGAAGTCCTTTGAGAATT
TCATTGTGCGATTTGACAGCCCCTTTCTGTTCGCCACGGTCCTCAGAGACACCCAGAGCA
TCATCTTTCTGGGCAAAGTCGTCAACCCCCATCCAGCCTAGAGCTCCCCTCTGACCCGTG
GGGCTTCTCGCTAAGGAGCTGGGTGCTCTGGGCTCTGGGGCAGCCTGGCCTCTACTCAGC
CATGAGCTGCCTCACCTTGCCTGTTCCCACTCACCCTTGGAAGGTGACAGTCACCTTCTG
GTGGCTCCACACACACAGGAGTCTGTGCCCTGCTCCGCGGAGGCTCTGAGACCTCCCACA
GCAATAAAGCATCTTTCTGAGCTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|9968809|emb|CAC06757.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|9968809|emb|CAC06757.1|

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               80-356, gnl|bosTau2|chr21 (40652739-40652466)
               

               
               80-356, gnl|Hg17|chr14 (94155283-94155559)
               

               
               80-356, gnl|Mm7|chr12 (101885776-101886052)
               


               
               504-917, gnl|bosTau2|chr21 (40700321-40699908)
               

               
               504-917, gnl|Hg17|chr14 (94159698-94160137)
               

               
               504-917, gnl|Mm7|chr12 (101907731-101908142)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               80-356, gnl|bosTau2|chr21 (40652739-40652466)
               

               
               80-356, gnl|Hg17|chr14 (94155283-94155559)
               

               
               80-356, gnl|Mm7|chr12 (101885776-101886052)
               


               
               504-917, gnl|bosTau2|chr21 (40700321-40699908)
               

               
               504-917, gnl|Hg17|chr14 (94159698-94160137)
               

               
               504-917, gnl|Mm7|chr12 (101907731-101908142)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eli (0.303628)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.303628)

	80-356, gnl\|bosTau2\|chr21 (40652739-40652466)
	80-356, gnl\|Hg17\|chr14 (94155283-94155559)
	80-356, gnl\|Mm7\|chr12 (101885776-101886052)

	504-917, gnl\|bosTau2\|chr21 (40700321-40699908)
	504-917, gnl\|Hg17\|chr14 (94159698-94160137)
	504-917, gnl\|Mm7\|chr12 (101907731-101908142)