Non-Coding RNA Search

Ss1.1-Pig3-SRG8028D12.3

Sequence:


               
               CTGGACTTAGGATGGGTTGGGACCACGGAGAAGGCATGAGGGAAATTTAAGGCTTAAGGC
GGTCCGTGTGATGCCAAATCCAGGGGTTAGGAGGAAGGACACAGCGTCCGGGGCAGGGCA
GGTGGTAGATCTCAGAAACAAAATCAAGCATCTCTTTTTTTTTTTTATCAAAAGAAAAAT
TGTAACTGGAATTGTATGATATATTTTTAAAAAAAAACATTCAGGACCTCATCCTTAGGT
GGGGGCTCTGCTCTCCACGGGGTCAAGTAAGAGCTGGCCCTCTGGGCTACCACAATCTGA
AATCAGCGAGGCATCGGGGTTAGGCGGGCTCGTTTTCCTTTTGAGTCGCGAACGCTGTGC
GTTTGTCAGAGTGAAGTATACAAGTCAATGGGTTTTTTTTTCCTTTTTATATAATAATTA
TATAACTTATGCATTTATACACTACGAGTTGATCTCGGCCAGCCAAAGATACACGACAAA
AAGAGACAATCAATGATATAATGTGGCCTTGAACTTTAACTCTGTATGCTTAATGTTTAC
AATATGAAGTTATTAGTTCTTAGAATGCAGAATGTATGTAATAAAATAAGCTTGGCCTAG
CATGGCAAATCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGACTTAGGATGGGTTGGGACCACGGAGAAGGCATGAGGGAAATTTAAGGCTTAAGGC
GGTCCGTGTGATGCCAAATCCAGGGGTTAGGAGGAAGGACACAGCGTCCGGGGCAGGGCA
GGTGGTAGATCTCAGAAACAAAATCAAGCATCTCTTTTTTTTTTTTATCAAAAGAAAAAT
TGTAACTGGAATTGTATGATATATTTTTAAAAAAAAACATTCAGGACCTCATCCTTAGGT
GGGGGCTCTGCTCTCCACGGGGTCAAGTAAGAGCTGGCCCTCTGGGCTACCACAATCTGA
AATCAGCGAGGCATCGGGGTTAGGCGGGCTCGTTTTCCTTTTGAGTCGCGAACGCTGTGC
GTTTGTCAGAGTGAAGTATACAAGTCAATGGGTTTTTTTTTCCTTTTTATATAATAATTA
TATAACTTATGCATTTATACACTACGAGTTGATCTCGGCCAGCCAAAGATACACGACAAA
AAGAGACAATCAATGATATAATGTGGCCTTGAACTTTAACTCTGTATGCTTAATGTTTAC
AATATGAAGTTATTAGTTCTTAGAATGCAGAATGTATGTAATAAAATAAGCTTGGCCTAG
CATGGCAAATCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-612, gnl|bosTau2|chr1 (97924116-97923471)
               

               
               1-612, gnl|Hg17|chr21 (38676421-38675822)
               

               
               1-612, gnl|Mm7|chr16 (95666698-95666092)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-612, gnl|bosTau2|chr1 (97924116-97923471)
               

               
               1-612, gnl|Hg17|chr21 (38676421-38675822)
               

               
               1-612, gnl|Mm7|chr16 (95666698-95666092)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               hea (0.204499)
               

               
               ton (0.1755)
               

               
               pla (0.133672)
               

               
               eru (0.120048)
               

               
               eje (0.0988338)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               ton (0.1755)
               

               
               pla (0.133672)
               

               
               eru (0.120048)
               

               
               eje (0.0988338)

	1-612, gnl\|bosTau2\|chr1 (97924116-97923471)
	1-612, gnl\|Hg17\|chr21 (38676421-38675822)
	1-612, gnl\|Mm7\|chr16 (95666698-95666092)

	hea (0.204499)
	ton (0.1755)
	pla (0.133672)
	eru (0.120048)
	eje (0.0988338)