Non-Coding RNA Search

Ss1.1-Pig3-SRG8028F16.5

Sequence:


               
               CATTTTTGTGCAAATTAATAAAAGGCCCATTCTTGTTTGATTTTAATGACAGCATATTTT
CTTATTTTTTAAGAGGAAAGTTAGAGTACAAACAGCTTTTCCGCTTTTGGGTTAGAACCA
TGCTTCCCTAGTTCACATTATTTTGGACACACGGTGGCAGTATATGAATGCCTAGTGTTG
GTGGACTACCAACTCAGTGTTCTGGTGTTTGTATTGGTTTTATTGAAAAGGTCGTTACTG
ACTTCCTAGCTTTTGTCTGTTTCTCCATAGTGGAAAGAGCATAATATTCTAGTCTTCTAA
AAGCTTGCTTCTCAAAGTATTGCCTGAGGACCAGCAGAACTGTCATTACCTGAGAGTGTG
TTAGAAATTTAGATCCTAGGGACATTTCACTGAAGCAGTCTGCGTTTAAACTCTTATGTA
AAACTCATTTATTCAAATATGCAGAAATTAATACAGAATTTTGCTCATACTCGATTTGTT
TGATAAATGGGCACATATGTAAATACATTGTTCTGAAATAGTTGTGAACGAGTATGACTT
GATGGAATGAATAAGTATGTATTTTTATTATAATAACACATTTCAACTTAAGAAAGAACT
GCAAACCAAACATCCTCGGAATAGTTTGTTCCAGTTTGCAAGCTATAAAAGATAATGCTC
TAGAAATCTTACAAACAGTGCTTTTCAAGCCTTTTAGTTTAAGAATGCCCTCTTAGACAC
ATTCTATTTTAATATCATCTAAGACAGATTTTTAGGTTTTTATAACTTACTGTCTTTAAT
TTCTAGGCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTTTTGTGCAAATTAATAAAAGGCCCATTCTTGTTTGATTTTAATGACAGCATATTTT
CTTATTTTTTAAGAGGAAAGTTAGAGTACAAACAGCTTTTCCGCTTTTGGGTTAGAACCA
TGCTTCCCTAGTTCACATTATTTTGGACACACGGTGGCAGTATATGAATGCCTAGTGTTG
GTGGACTACCAACTCAGTGTTCTGGTGTTTGTATTGGTTTTATTGAAAAGGTCGTTACTG
ACTTCCTAGCTTTTGTCTGTTTCTCCATAGTGGAAAGAGCATAATATTCTAGTCTTCTAA
AAGCTTGCTTCTCAAAGTATTGCCTGAGGACCAGCAGAACTGTCATTACCTGAGAGTGTG
TTAGAAATTTAGATCCTAGGGACATTTCACTGAAGCAGTCTGCGTTTAAACTCTTATGTA
AAACTCATTTATTCAAATATGCAGAAATTAATACAGAATTTTGCTCATACTCGATTTGTT
TGATAAATGGGCACATATGTAAATACATTGTTCTGAAATAGTTGTGAACGAGTATGACTT
GATGGAATGAATAAGTATGTATTTTTATTATAATAACACATTTCAACTTAAGAAAGAACT
GCAAACCAAACATCCTCGGAATAGTTTGTTCCAGTTTGCAAGCTATAAAAGATAATGCTC
TAGAAATCTTACAAACAGTGCTTTTCAAGCCTTTTAGTTTAAGAATGCCCTCTTAGACAC
ATTCTATTTTAATATCATCTAAGACAGATTTTTAGGTTTTTATAACTTACTGTCTTTAAT
TTCTAGGCAAAA

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               3-258, gnl|bosTau2|chr16 (4805754-4806002)
               

               
               3-258, gnl|Hg17|chr1 (189720557-189720309)
               


               
               406-613, gnl|bosTau2|chr16 (4808900-4809124)
               

               
               406-613, gnl|Hg17|chr1 (189717602-189717392)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-258, gnl|bosTau2|chr16 (4805754-4806002)
               

               
               3-258, gnl|Hg17|chr1 (189720557-189720309)
               


               
               406-613, gnl|bosTau2|chr16 (4808900-4809124)
               

               
               406-613, gnl|Hg17|chr1 (189717602-189717392)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lyg (0.133103)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.133103)

	3-258, gnl\|bosTau2\|chr16 (4805754-4806002)
	3-258, gnl\|Hg17\|chr1 (189720557-189720309)

	406-613, gnl\|bosTau2\|chr16 (4808900-4809124)
	406-613, gnl\|Hg17\|chr1 (189717602-189717392)