Non-Coding RNA Search

Ss1.1-Pig3-SRG8028L22.3

Sequence:


               
               CTTGGGTGCAGCCCTAAAAAGACAATAAATAAATAAATCCATATCGTGTTTTGATATTTA
ACTCCAAATTCTTAGTTCCGGTCATTGCCATTTTTAAGGTTTCTATTTTTGTTATAAATA
GCAAATAAGATGATAACTTTAAAACCTTTGCAATGTGCCTGTTTTATTCATAGCCTTTTG
TGCCACCACCTTTTGAAGGGTAGTCAGCAAGATGGAAGGCCATTACAAGCAGCATCATTG
AGACTATAAAAAAAGGAGCCTCTGACCTTGGGCAGCTTGCTGCTTAATTGGAGAGACCAG
CATGTTCGGGCCATTTATTATAAAGGTTAAACCCACAAGTCTGGCGCCACGCTCTCTAGG
TTCAGTTCCTCACCTATCCGTCTGTGAGCTCTGTGACTTTGGGCAACTTAATTAAATGTC
CCTGTGCTACAGTCTCCCTGTCTTAAGATAGGGGATAGAGTACCTTTTCATAGAGTATGT
AAGATGAAATTATTACAGACTTATAAACCACTGACAACTAACTCAATAAATGTGTACAAT
GATTTATATGAGAAATAATCTAATGAATGTAGGTGGAATTACAAGTTTCGGGTTTGAACT
AAATAGAATGTTCAATGGCTCTGCCAACAGTCTCATACTTTTCTCCACAGTCAAAATCTG
AAACCGTTTCAAAAGAAATAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGGGTGCAGCCCTAAAAAGACAATAAATAAATAAATCCATATCGTGTTTTGATATTTA
ACTCCAAATTCTTAGTTCCGGTCATTGCCATTTTTAAGGTTTCTATTTTTGTTATAAATA
GCAAATAAGATGATAACTTTAAAACCTTTGCAATGTGCCTGTTTTATTCATAGCCTTTTG
TGCCACCACCTTTTGAAGGGTAGTCAGCAAGATGGAAGGCCATTACAAGCAGCATCATTG
AGACTATAAAAAAAGGAGCCTCTGACCTTGGGCAGCTTGCTGCTTAATTGGAGAGACCAG
CATGTTCGGGCCATTTATTATAAAGGTTAAACCCACAAGTCTGGCGCCACGCTCTCTAGG
TTCAGTTCCTCACCTATCCGTCTGTGAGCTCTGTGACTTTGGGCAACTTAATTAAATGTC
CCTGTGCTACAGTCTCCCTGTCTTAAGATAGGGGATAGAGTACCTTTTCATAGAGTATGT
AAGATGAAATTATTACAGACTTATAAACCACTGACAACTAACTCAATAAATGTGTACAAT
GATTTATATGAGAAATAATCTAATGAATGTAGGTGGAATTACAAGTTTCGGGTTTGAACT
AAATAGAATGTTCAATGGCTCTGCCAACAGTCTCATACTTTTCTCCACAGTCAAAATCTG
AAACCGTTTCAAAAGAAATAAAAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               133-678, gnl|bosTau2|chr23 (25661060-25661613)
               

               
               133-678, gnl|Hg17|chr6 (28401075-28400531)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               133-678, gnl|bosTau2|chr23 (25661060-25661613)
               

               
               133-678, gnl|Hg17|chr6 (28401075-28400531)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fbs (0.175346)
               

               
               che (0.136314)
               

               
               kid (0.129735)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               che (0.136314)
               

               
               kid (0.129735)
               

               
               spc (0.113366)

	133-678, gnl\|bosTau2\|chr23 (25661060-25661613)
	133-678, gnl\|Hg17\|chr6 (28401075-28400531)