Non-Coding RNA Search

Ss1.1-Pig3-SRG8028M24.3

Sequence:


               
               CGCCGCCCGCCGCCCGCCGCCCGGTTTTGGTAGTGCCCCTGCCCGCCCTCACCTGCCGAG
AAACTGCGCCTCGCCTGGGAGAGCCCGGGAGCCGGCGCGGTCCCTCGCCCGGAGCGCCCG
CCCGCCCGCCCAGGGGTCGTTTTTTTAGCTTTGTGTTTACTTTTTGGCCGGAGCGGAGCC
GAGGAGCCGCCCCGAGTGCCTGCTCCCCGCTGGGCCTCGTGGGCCGGCCAGGAGTTCTGT
TGTGTTCTGTTGAAGGTGCCATTTTAAATTTTATTTTTATTACTTTTTTTGTAGATGAAC
TTAAGCTCTGTAACTTACACCCGGAATGTTAGGGTCGGCGTGGCCAGCGGCCGGCCGAGC
TGCCTGGTGGGGTGGCCCCTTGTCTTTTCAAGTAATTTTCATATTAAAAAAAACAAAGAA
AAAAAAACTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCCGCCCGCCGCCCGCCGCCCGGTTTTGGTAGTGCCCCTGCCCGCCCTCACCTGCCGAG
AAACTGCGCCTCGCCTGGGAGAGCCCGGGAGCCGGCGCGGTCCCTCGCCCGGAGCGCCCG
CCCGCCCGCCCAGGGGTCGTTTTTTTAGCTTTGTGTTTACTTTTTGGCCGGAGCGGAGCC
GAGGAGCCGCCCCGAGTGCCTGCTCCCCGCTGGGCCTCGTGGGCCGGCCAGGAGTTCTGT
TGTGTTCTGTTGAAGGTGCCATTTTAAATTTTATTTTTATTACTTTTTTTGTAGATGAAC
TTAAGCTCTGTAACTTACACCCGGAATGTTAGGGTCGGCGTGGCCAGCGGCCGGCCGAGC
TGCCTGGTGGGGTGGCCCCTTGTCTTTTCAAGTAATTTTCATATTAAAAAAAACAAAGAA
AAAAAAACTCAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-429, gnl|bosTau2|chr21 (49383933-49383529)
               

               
               3-429, gnl|Hg17|chr14 (105007659-105008090)
               

               
               3-429, gnl|Mm7|chr12 (110661707-110662132)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-429, gnl|bosTau2|chr21 (49383933-49383529)
               

               
               3-429, gnl|Hg17|chr14 (105007659-105008090)
               

               
               3-429, gnl|Mm7|chr12 (110661707-110662132)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               pty (0.142714)
               

               
               nca (0.136874)
               

               
               che (0.136314)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)
               

               
               nca (0.136874)
               

               
               che (0.136314)

	3-429, gnl\|bosTau2\|chr21 (49383933-49383529)
	3-429, gnl\|Hg17\|chr14 (105007659-105008090)
	3-429, gnl\|Mm7\|chr12 (110661707-110662132)