Non-Coding RNA Search

Ss1.1-Pig3-SRG8028P22.3

Sequence:


               
               GGACCATGCTCG------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
CTTTCCTTTGAAAAAGGACATGTTGTATGATACATAAAAAAGAATACAAAGCCTTTTACT
CCAAAGTGAATTAAGAGCTTATCCTTAGAATTTAATCAGTCCAGTAAAAGAATATATGAT
TAACATATATTTTAAAGAGGGGAGAGAAAATGTGGTAGGTTTGAGGATCAGGAGGCTATT
TGGACAGTAAAGGATAAATATGAGGAAGATGCTGGAAACAAACTTTGGTCAACTCATTTG
CTGCGAGTAGGGAAAAGCACGTGTGTGGTTTTGAAACATTGCTCTTTCTATAACATACCA
ATAACTTCTTAAATAAAAATAAGATCATCATCTTAAAGGAACCATAGTCCCAGAGAATTC
ATTAAGTACCACCAAAGCAGATTATAAAACTGGATGAAACTTGCGAAGTTTTTTTTTTCT
CTAATTTCTAATGATCCAGTAGTGATTGAGGGTTCTAAGTATATAACATTTAATAATCAT
TTTCGCCTTTTGACTATATTCCTGTGCCTACAAAATATGACACTTGTGGGTATACTTACC
TAATATGGAGCCAGAATTAATGAATGAGGATGTACTTACTCTAAAGCCCTAATATAATTC
AAACTTTAATAAGATGGTTTCTCTTAGAGGAAATTTTATACATTTATACATTTATTGAAC
AGAAAAACAGAAATCACATTTAAACTATAAAGTAGTTCAAAGGGAAACAAACTTGAACTG
GCAAATTCCTGCCTGGCCCATGTTTTGGTTTCCCAGCTACCATTTTTAAAAGTTTGTTCC
CGAATCTTCTCTACTTCAAAGCCCTACTTCATCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACCATGCTCG------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
CTTTCCTTTGAAAAAGGACATGTTGTATGATACATAAAAAAGAATACAAAGCCTTTTACT
CCAAAGTGAATTAAGAGCTTATCCTTAGAATTTAATCAGTCCAGTAAAAGAATATATGAT
TAACATATATTTTAAAGAGGGGAGAGAAAATGTGGTAGGTTTGAGGATCAGGAGGCTATT
TGGACAGTAAAGGATAAATATGAGGAAGATGCTGGAAACAAACTTTGGTCAACTCATTTG
CTGCGAGTAGGGAAAAGCACGTGTGTGGTTTTGAAACATTGCTCTTTCTATAACATACCA
ATAACTTCTTAAATAAAAATAAGATCATCATCTTAAAGGAACCATAGTCCCAGAGAATTC
ATTAAGTACCACCAAAGCAGATTATAAAACTGGATGAAACTTGCGAAGTTTTTTTTTTCT
CTAATTTCTAATGATCCAGTAGTGATTGAGGGTTCTAAGTATATAACATTTAATAATCAT
TTTCGCCTTTTGACTATATTCCTGTGCCTACAAAATATGACACTTGTGGGTATACTTACC
TAATATGGAGCCAGAATTAATGAATGAGGATGTACTTACTCTAAAGCCCTAATATAATTC
AAACTTTAATAAGATGGTTTCTCTTAGAGGAAATTTTATACATTTATACATTTATTGAAC
AGAAAAACAGAAATCACATTTAAACTATAAAGTAGTTCAAAGGGAAACAAACTTGAACTG
GCAAATTCCTGCCTGGCCCATGTTTTGGTTTCCCAGCTACCATTTTTAAAAGTTTGTTCC
CGAATCTTCTCTACTTCAAAGCCCTACTTCATCTTC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               23-305, gnl|bosTau2|chr12 (26197821-26198096)
               

               
               23-305, gnl|Hg17|chr13 (76476677-76476418)
               


               
               484-826, gnl|bosTau2|chr12 (26198103-26198434)
               

               
               484-826, gnl|Hg17|chr13 (76476409-76475596)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-305, gnl|bosTau2|chr12 (26197821-26198096)
               

               
               23-305, gnl|Hg17|chr13 (76476677-76476418)
               


               
               484-826, gnl|bosTau2|chr12 (26198103-26198434)
               

               
               484-826, gnl|Hg17|chr13 (76476409-76475596)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	23-305, gnl\|bosTau2\|chr12 (26197821-26198096)
	23-305, gnl\|Hg17\|chr13 (76476677-76476418)

	484-826, gnl\|bosTau2\|chr12 (26198103-26198434)
	484-826, gnl\|Hg17\|chr13 (76476409-76475596)