Non-Coding RNA Search

Ss1.1-Pig4-TMW8001D06.3

Sequence:


               
               TAGACAGCCTAGTCTGGGGACCTAACCTGCCTGTACACCCAGATCCCACCCATGGGGAGC
ATCCTGGTCCTGTCCCTCCTGCCCTGGACCCTGGCCATTCCGCCACAAGCCCCACTCTCA
GTACAACAGACCCTGTCCCATCCGCACACCTAGACTCAGTTCACAAGGCCATTAATTCCA
GCTCTCCTGAACTTCCAGACCCTACCCACAGCACTAAAAGCTCCACCTCTAGTGCCATAA
GCCCTACCCATAGTGCTCCAAGCCTCACTCACACCACCACAGGTTCTACCCACAAGCCTA
TTGTCTCTCCCCTCACCACTGCAGGCCTTACCCCCAGTACCACAAGCCCAGTCCAGACCA
CCACAAGCCCTACCCAAAAGCCAGTGCTTTCTACCCTCACTCCTGTAGCTCCTACCCCCA
GTACCACAGGCCCAGTCCAGACCACCACGAGCCTCAGCCACACTGTTACAAACCTGACAC
ACACTGTCACAAGCCCCATCAACAAGCCTATGGTCTCTTCCCTGACTACTTCAGGCCCTT
CCCCCAGTACCACAGGCCCAGCCCTGACTACCACAAGCCCCACCCACACCCCTGCAACCC
CTGCTCACAAAGCCAGCATGTCAACTCACCCCACTAGAAGCCCTACACCCAATGCTGAGG
GCCTAGTCCAGACCACCATGAGTACCACCCGTCCTGTCACAAGCCCAACCCTTATAACTG
TAAGCCCTTCCACTTTTCTAGACCTTGCCACACTCTCCAGCCCCTCTGCAAACACAGACC
CCACCCTCCCAAGCACCGACCCCCTCTCCTGTAGCTACCCTGCCTCCACTCCCTGCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGACAGCCTAGTCTGGGGACCTAACCTGCCTGTACACCCAGATCCCACCCATGGGGAGC
ATCCTGGTCCTGTCCCTCCTGCCCTGGACCCTGGCCATTCCGCCACAAGCCCCACTCTCA
GTACAACAGACCCTGTCCCATCCGCACACCTAGACTCAGTTCACAAGGCCATTAATTCCA
GCTCTCCTGAACTTCCAGACCCTACCCACAGCACTAAAAGCTCCACCTCTAGTGCCATAA
GCCCTACCCATAGTGCTCCAAGCCTCACTCACACCACCACAGGTTCTACCCACAAGCCTA
TTGTCTCTCCCCTCACCACTGCAGGCCTTACCCCCAGTACCACAAGCCCAGTCCAGACCA
CCACAAGCCCTACCCAAAAGCCAGTGCTTTCTACCCTCACTCCTGTAGCTCCTACCCCCA
GTACCACAGGCCCAGTCCAGACCACCACGAGCCTCAGCCACACTGTTACAAACCTGACAC
ACACTGTCACAAGCCCCATCAACAAGCCTATGGTCTCTTCCCTGACTACTTCAGGCCCTT
CCCCCAGTACCACAGGCCCAGCCCTGACTACCACAAGCCCCACCCACACCCCTGCAACCC
CTGCTCACAAAGCCAGCATGTCAACTCACCCCACTAGAAGCCCTACACCCAATGCTGAGG
GCCTAGTCCAGACCACCATGAGTACCACCCGTCCTGTCACAAGCCCAACCCTTATAACTG
TAAGCCCTTCCACTTTTCTAGACCTTGCCACACTCTCCAGCCCCTCTGCAAACACAGACC
CCACCCTCCCAAGCACCGACCCCCTCTCCTGTAGCTACCCTGCCTCCACTCCCTGCTCTC

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-818, gnl|bosTau2|chr18 (15237611-15236810)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-818, gnl|bosTau2|chr18 (15237611-15236810)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)