Non-Coding RNA Search

Ss1.1-Pig4-TMW8002A01.5

Sequence:


               
               GCGAGGCCCAGGTGAAAAAGGACGCCTGAGTCCTGGGTGAGAGTCTTCCCGGGTACTTTG
GGGCTAGAGGAATCCTGAAACCATGGATCACCTATATATGCTTTGAGACATGCTTTAGAT
TTTTTTTTTCTGGAAGCCCTGCAGCTACCCTAAAATTGAATGTATTGTTGCACAGACCTA
TGGTGAAGCGACTTCCAGTCATTTGGAAAGGATGGGATGAAAAGGAACCTTGGTGATAAT
TTTGATGTCTGCAAGATTTAGTACCAGTGTAATGGGATTATCGGTAACACCTTCACTGCA
GAAAAAGCCACCTGGCGCTATAACTGGCAGCAACTGAGAACTAATCCTTTCCCATCTCTT
GGATGTCATTCATGAAGCTCAAAGCGATTTCTATCCCGCTAACTGTGATTAATTTTATAA
ACAACAACAACCAAAAGAATCAGGTGATCAAGGCAAATAATATGCTTTTTATTAATTAAA
ATGTTGCCTTATTATAAGCTATATGACTCATAAATTATGTAAGATGTAAATAACATAAAC
TATGTGTATGACTTAAACCCCCCTAAAATGTTCAAATAGAAAAATTGATTAATAATGTCT
TTTATACTTTTTTGGGTTCTTTGACGTAATGTATTTGCTGTGGTAAAGATTTATACTCAA
GATTAAATATTAATTTAAATACTTTAGTGCTCTTTTAGCTATACCCACCGTCACTAAATT
ACATCAAAATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGAGGCCCAGGTGAAAAAGGACGCCTGAGTCCTGGGTGAGAGTCTTCCCGGGTACTTTG
GGGCTAGAGGAATCCTGAAACCATGGATCACCTATATATGCTTTGAGACATGCTTTAGAT
TTTTTTTTTCTGGAAGCCCTGCAGCTACCCTAAAATTGAATGTATTGTTGCACAGACCTA
TGGTGAAGCGACTTCCAGTCATTTGGAAAGGATGGGATGAAAAGGAACCTTGGTGATAAT
TTTGATGTCTGCAAGATTTAGTACCAGTGTAATGGGATTATCGGTAACACCTTCACTGCA
GAAAAAGCCACCTGGCGCTATAACTGGCAGCAACTGAGAACTAATCCTTTCCCATCTCTT
GGATGTCATTCATGAAGCTCAAAGCGATTTCTATCCCGCTAACTGTGATTAATTTTATAA
ACAACAACAACCAAAAGAATCAGGTGATCAAGGCAAATAATATGCTTTTTATTAATTAAA
ATGTTGCCTTATTATAAGCTATATGACTCATAAATTATGTAAGATGTAAATAACATAAAC
TATGTGTATGACTTAAACCCCCCTAAAATGTTCAAATAGAAAAATTGATTAATAATGTCT
TTTATACTTTTTTGGGTTCTTTGACGTAATGTATTTGCTGTGGTAAAGATTTATACTCAA
GATTAAATATTAATTTAAATACTTTAGTGCTCTTTTAGCTATACCCACCGTCACTAAATT
ACATCAAAATGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               58-182, gnl|bosTau2|chr22 (9463772-9463892)
               

               
               58-182, gnl|Hg17|chr11 (63156116-63156240)
               

               
               58-182, gnl|Mm7|chr10 (93586628-93586756)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-182, gnl|bosTau2|chr22 (9463772-9463892)
               

               
               58-182, gnl|Hg17|chr11 (63156116-63156240)
               

               
               58-182, gnl|Mm7|chr10 (93586628-93586756)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)

	58-182, gnl\|bosTau2\|chr22 (9463772-9463892)
	58-182, gnl\|Hg17\|chr11 (63156116-63156240)
	58-182, gnl\|Mm7\|chr10 (93586628-93586756)