Non-Coding RNA Search

Ss1.1-Pig4-TMW8002B07.3

Sequence:


               
               GCTGGGCTGTGGTGACGCTGGGGAAAGCTTCAGCTTGTCGACCCAGTCTGTGTCACAGGT
GGACAGGGGAGAAGCCCCTGTCTCCCCATTTGCCCTGGGATCTTCTAGACTTTTGCTTTT
GAGTTTCCTAGGCGGGGGGAGGGGAGGGAGGAAACATCGGCGGGGTCCGCGTGATGTCCC
TGAGGCAGGAGAGGTGGGGACGGACAGGGCCACTGGGGGAAGCTGGTGAGGGAGGGTGGG
TGGGGCGGGAAAGTCACTGGACACCCGTCCCCTGGACAGAGTCTAGAGGAGCCCTGGGCT
GCTGGGACCTTTAACCTTGACCTTGATTTTCCAACTTTCTCTTCCTAGTCCCCTGCTTCT
GGGCCTCCCTCTCTTCCTGTCCTTTCCCGGGTGTCCTCTTCACAGGCCTCTCTGGCCACC
GCTTTATATCTGGGTTTTTCACGCTTTTGTAGAACTAAGGTTTCAATAAACAGTTTCGGT
TGCAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGGGCTGTGGTGACGCTGGGGAAAGCTTCAGCTTGTCGACCCAGTCTGTGTCACAGGT
GGACAGGGGAGAAGCCCCTGTCTCCCCATTTGCCCTGGGATCTTCTAGACTTTTGCTTTT
GAGTTTCCTAGGCGGGGGGAGGGGAGGGAGGAAACATCGGCGGGGTCCGCGTGATGTCCC
TGAGGCAGGAGAGGTGGGGACGGACAGGGCCACTGGGGGAAGCTGGTGAGGGAGGGTGGG
TGGGGCGGGAAAGTCACTGGACACCCGTCCCCTGGACAGAGTCTAGAGGAGCCCTGGGCT
GCTGGGACCTTTAACCTTGACCTTGATTTTCCAACTTTCTCTTCCTAGTCCCCTGCTTCT
GGGCCTCCCTCTCTTCCTGTCCTTTCCCGGGTGTCCTCTTCACAGGCCTCTCTGGCCACC
GCTTTATATCTGGGTTTTTCACGCTTTTGTAGAACTAAGGTTTCAATAAACAGTTTCGGT
TGCAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-484, gnl|bosTau2|chr2 (65115437-65114964)
               

               
               4-484, gnl|Hg17|chr2 (219862615-219862124)
               

               
               4-484, gnl|Mm7|chr1 (75359883-75359450)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-484, gnl|bosTau2|chr2 (65115437-65114964)
               

               
               4-484, gnl|Hg17|chr2 (219862615-219862124)
               

               
               4-484, gnl|Mm7|chr1 (75359883-75359450)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               cga (0.279096)
               

               
               col (0.195008)
               

               
               fty (0.17584)
               

               
               ill (0.175593)
               

               
               eli (0.151814)
               

               
               eep (0.122564)
               

               
               jej (0.0989218)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)
               

               
               col (0.195008)
               

               
               fty (0.17584)
               

               
               ill (0.175593)
               

               
               eli (0.151814)
               

               
               eep (0.122564)
               

               
               jej (0.0989218)

	4-484, gnl\|bosTau2\|chr2 (65115437-65114964)
	4-484, gnl\|Hg17\|chr2 (219862615-219862124)
	4-484, gnl\|Mm7\|chr1 (75359883-75359450)

	cga (0.279096)
	col (0.195008)
	fty (0.17584)
	ill (0.175593)
	eli (0.151814)
	eep (0.122564)
	jej (0.0989218)