Ss1.1-Pig4-TMW8002H23.5
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TTTGAGAGGTGGACCAGGTATCAGCTTCACAAAAAAGTTTTAGAACAGAATTTAAGTTCT
TGACTATCATCATTTGACCTTCCACATGGTTATCATCATCAAATACATGATTATAAAATG
GCTATTTTTTAGTACTACTATTTGTGATTGCCACAACTTTGAGACCAAGCTAGGGATAAT
AAATTAGTTAAGATACTTTCTTAACCTTACATACAACATAATAACTCTAATTCAATCCTA
TAAATTCTCTTTGCACTGTTTAGCTGAATGAAAATTGAAATAAAATTGTAAACTTTTTTC
CTTCAGTAACCCATTTTATAGTTAACGTACCAGGTCTGAAGTGATGACCCAAAGTCCAGG
TAGAATTGAAGATGATGTGTGTCTAGAATATTGGTTGTGAGAAACTGATTGAAAGGGAAG
AAAACAACACACTGTCAAATATTATAAGCTAGAATATAATAAATTCCAAAGGAATGGTTA
CTCAGAAACTAGTTAAAGAGCAAGCCTATGTAAGGCCCATTTTCCCTCCTTTCACTCATT
TCAGGTATTTTATTGGAAAATGTTAGGCTAAAGACCTGAGAAATTTAGCAAATGCTATTG
ACTGTGAAATTTGCTTTATCTCTGCTGATGATTTTTAGTTTGGTTTTACAATCAAGCCTA
CTGCTTGCAGTTAAAGTATCAATCTGAAATGCATCTATAATTCCCAGCCACACAAGTCCT
TATTGTCATTATTTTTAAGAATCTAATTTTATTGGAAATTAGCAAACTTGCATATTTTGG
TCTCTTACCTCAGGGAAGATCACTTGCTAGCAACTCACATACGACTAATGACAGGTTTTT
ATGAATTGTACTGACATCACGTTAGCTACTAAATGCAAAGTTGATAACAATATTATGTAG
TTACCTACTAATAACTAACTGGCTGCTAGTGAACATTTCTCTAAAAAATTTAAACCTCAC
TAATAACTAACTTTTAGGTATGAAATAAACTTGTAACTTGTCTTTACGCTTTGGTCAATA
AAGTGACAATATGAAAATTTTTATTTCAGAATATCAACACCATTTGTCTTCATTTTTCAA
CAGGAATTTTAATTAGCCCCTACATAAAATACAACAGAGCAGATTTTGAGAGTTTCATGG
TTCTCAAAACCAGGTTTCTGTATTAAAAGATGTTCATTAAAAAACCCTGCAAAATCGGAT
TAAACTCTGCTCATCTTAATATGAATTTAAAATGACCTTTTGTAATAGTCATAGTGAGCT
ATATACTCTGAGTTGGGGTATCCTATATTTCAAGGTTATCATACAATTTAACAAAATTGC
ACAACCTCAAGGCTATTCACAATATAATTAATGTTTCAAACCACAACTATTCACTTGAAA
ACATACCATAGAAGAATGTTTACTTAAGAAATAACGAAAGGGGAGTTATATCACCTTGTA
AGATTTATAGTTAATTATAAGTTCTGCCATTCTTAATAATTCCTTGAGATGCTAAGTGTT
TCAATTCATATTTAACTTAAATCGTGAGAATTTTAATGTTTGTTCCAAAATAGCAGAAAT
TGTAAAAATTGTGAATTATTGGAGAAAATGCCATTACTTGTATATTTGACATTTAATTTT
TAAAATTATGGAGTCTACATGCTTTTGTAGTATAATATTAATACAATGATTATTCTCTTG
TAAAAGGAAAACTAGTAAAAAAAGTTTTAGTTGATGTTATTTGCTTGTGAGTATCAATTA
CTTAGTATTTAAAATTGTAAGGTATTGCATACTTTTCTTTAGAATGCACACAACCCTTCT
TGAGCCTTTATGCCTGTGGTAGAGCAATAAAGAAATAAAAAGGTTGTCAGTATTTTCAGG
TTTATTTAACTTTAAGAATTAGTGCCAAGAGCTGGAGAGTCTACTTTTTGGAGGGAAATG
TTATTTAGAATATGTAAAAATAAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTGAGAGGTGGACCAGGTATCAGCTTCACAAAAAAGTTTTAGAACAGAATTTAAGTTCT
TGACTATCATCATTTGACCTTCCACATGGTTATCATCATCAAATACATGATTATAAAATG
GCTATTTTTTAGTACTACTATTTGTGATTGCCACAACTTTGAGACCAAGCTAGGGATAAT
AAATTAGTTAAGATACTTTCTTAACCTTACATACAACATAATAACTCTAATTCAATCCTA
TAAATTCTCTTTGCACTGTTTAGCTGAATGAAAATTGAAATAAAATTGTAAACTTTTTTC
CTTCAGTAACCCATTTTATAGTTAACGTACCAGGTCTGAAGTGATGACCCAAAGTCCAGG
TAGAATTGAAGATGATGTGTGTCTAGAATATTGGTTGTGAGAAACTGATTGAAAGGGAAG
AAAACAACACACTGTCAAATATTATAAGCTAGAATATAATAAATTCCAAAGGAATGGTTA
CTCAGAAACTAGTTAAAGAGCAAGCCTATGTAAGGCCCATTTTCCCTCCTTTCACTCATT
TCAGGTATTTTATTGGAAAATGTTAGGCTAAAGACCTGAGAAATTTAGCAAATGCTATTG
ACTGTGAAATTTGCTTTATCTCTGCTGATGATTTTTAGTTTGGTTTTACAATCAAGCCTA
CTGCTTGCAGTTAAAGTATCAATCTGAAATGCATCTATAATTCCCAGCCACACAAGTCCT
TATTGTCATTATTTTTAAGAATCTAATTTTATTGGAAATTAGCAAACTTGCATATTTTGG
TCTCTTACCTCAGGGAAGATCACTTGCTAGCAACTCACATACGACTAATGACAGGTTTTT
ATGAATTGTACTGACATCACGTTAGCTACTAAATGCAAAGTTGATAACAATATTATGTAG
TTACCTACTAATAACTAACTGGCTGCTAGTGAACATTTCTCTAAAAAATTTAAACCTCAC
TAATAACTAACTTTTAGGTATGAAATAAACTTGTAACTTGTCTTTACGCTTTGGTCAATA
AAGTGACAATATGAAAATTTTTATTTCAGAATATCAACACCATTTGTCTTCATTTTTCAA
CAGGAATTTTAATTAGCCCCTACATAAAATACAACAGAGCAGATTTTGAGAGTTTCATGG
TTCTCAAAACCAGGTTTCTGTATTAAAAGATGTTCATTAAAAAACCCTGCAAAATCGGAT
TAAACTCTGCTCATCTTAATATGAATTTAAAATGACCTTTTGTAATAGTCATAGTGAGCT
ATATACTCTGAGTTGGGGTATCCTATATTTCAAGGTTATCATACAATTTAACAAAATTGC
ACAACCTCAAGGCTATTCACAATATAATTAATGTTTCAAACCACAACTATTCACTTGAAA
ACATACCATAGAAGAATGTTTACTTAAGAAATAACGAAAGGGGAGTTATATCACCTTGTA
AGATTTATAGTTAATTATAAGTTCTGCCATTCTTAATAATTCCTTGAGATGCTAAGTGTT
TCAATTCATATTTAACTTAAATCGTGAGAATTTTAATGTTTGTTCCAAAATAGCAGAAAT
TGTAAAAATTGTGAATTATTGGAGAAAATGCCATTACTTGTATATTTGACATTTAATTTT
TAAAATTATGGAGTCTACATGCTTTTGTAGTATAATATTAATACAATGATTATTCTCTTG
TAAAAGGAAAACTAGTAAAAAAAGTTTTAGTTGATGTTATTTGCTTGTGAGTATCAATTA
CTTAGTATTTAAAATTGTAAGGTATTGCATACTTTTCTTTAGAATGCACACAACCCTTCT
TGAGCCTTTATGCCTGTGGTAGAGCAATAAAGAAATAAAAAGGTTGTCAGTATTTTCAGG
TTTATTTAACTTTAAGAATTAGTGCCAAGAGCTGGAGAGTCTACTTTTTGGAGGGAAATG
TTATTTAGAATATGTAAAAATAAG
|
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1-268, gnl|bosTau2|chr14 (19066633-19066896) |
|
1-268, gnl|canFam2|chr29 (19209042-19209592) |
|
1-268, gnl|dasNov1|scaffold_71691 (11-586) |
|
1-268, gnl|echTel1|scaffold_309102 (6460-5891) |
|
1-268, gnl|hg17|chr8 (67706472-67707053) |
|
1-268, gnl|Hg17|chr8 (67707068-67706791) |
|
1-268, gnl|loxAfr1|scaffold_259 (53831-53270) |
|
1-268, gnl|mm7|chr1 (9864399-9864916) |
|
1-268, gnl|monDom2|scaffold_4 (94883203-94882569) |
|
1-268, gnl|oryCun1|scaffold_211013 (115407-114694) |
|
1-268, gnl|panTro1|chr7 (69721318-69721896) |
|
1-268, gnl|rheMac2|chr8 (69261916-69262495) |
|
1-268, gnl|rn3|chr5 (9117730-9117216) |
| |
|
319-1944, gnl|bosTau2|chr14 (19066907-19068516) |
|
319-1944, gnl|Hg17|chr8 (67706746-67705123) |
|
319-1944, gnl|Mm7|chr1 (9864688-9863044) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-268, gnl|bosTau2|chr14 (19066633-19066896) |
|
1-268, gnl|canFam2|chr29 (19209042-19209592) |
|
1-268, gnl|dasNov1|scaffold_71691 (11-586) |
|
1-268, gnl|echTel1|scaffold_309102 (6460-5891) |
|
1-268, gnl|hg17|chr8 (67706472-67707053) |
|
1-268, gnl|Hg17|chr8 (67707068-67706791) |
|
1-268, gnl|loxAfr1|scaffold_259 (53831-53270) |
|
1-268, gnl|mm7|chr1 (9864399-9864916) |
|
1-268, gnl|monDom2|scaffold_4 (94883203-94882569) |
|
1-268, gnl|oryCun1|scaffold_211013 (115407-114694) |
|
1-268, gnl|panTro1|chr7 (69721318-69721896) |
|
1-268, gnl|rheMac2|chr8 (69261916-69262495) |
|
1-268, gnl|rn3|chr5 (9117730-9117216) |
| |
|
319-1944, gnl|bosTau2|chr14 (19066907-19068516) |
|
319-1944, gnl|Hg17|chr8 (67706746-67705123) |
|
319-1944, gnl|Mm7|chr1 (9864688-9863044) |
|
cbl (0.344392) |
|
bfe (0.299715) |
|
ret (0.257467) |
|
cbr (0.255951) |
|
sin (0.174948) |
|
eye (0.170503) |
|
fco (0.157208) |
|
tbr (0.154178) |
|
liv (0.146284) |
|
tra (0.123092) |
|
ldo (0.0970026) |
|
cbl (0.344392) |
|
bfe (0.299715) |
|
ret (0.257467) |
|
cbr (0.255951) |
|
sin (0.174948) |
|
eye (0.170503) |
|
fco (0.157208) |
|
tbr (0.154178) |
|
liv (0.146284) |
|
tra (0.123092) |
|
ldo (0.0970026) |
