Non-Coding RNA Search

Ss1.1-Pig4-TMW8002I06.5

Sequence:


               
               CAATTTCAAAGCAGGCAGAGGGGATAGGAGCAAAAAGCTGAAATTTAGAAAAGCTTTACC
TTTATCTCTTCCCTTTTCTTCTCTCTCTTCTTCCCCACACCCCATACCCACTTTTTGAAG
AAAGTCTTGGTAGTCATCCTGGCTTTGGAAAAGAGATTTGTTTAGTTTCACTCTGCTGGC
TCTGCAAAGATGGATAGAGCTGCTCAGGTGGCAGTGATACTCTTGGAATTGCTGGGAAAT
TTAGGGAGGGAGGTGGTGGAAGATGGGGGTAGAATTCTTGTCTAACTTCCCTTTATCTAA
CGCTTATAAAGAGAGCTAGTACAGCCTATTTGAGTTTAGATGATACTTAGTTGTTTTGTC
ACTTGTAAAGGATAAGCATTTTCAAGAACAGGATTACACAGAAACTCAAAGACCCTCCTT
TATTCTTCCATGGAGCTGTGTTATTCCAAAATGTTTTACATCCGGGCCCTAGGGAGTTGA
GTAGTTCATTGTTTCGGTGTGCCATTGATGGGACACAGGGGGAGTGGGGAGAAATGTATA
GCTCTCCATATTCATTCCATCAAGAACTGGTCAGGTTGCAGAACTTCACGAAGGCTTTAC
TAATAATCTTATTGCTCTGACATTATATAAAAGTAGTATTAAGAGTGTGTGACTTTTCCA
AGTGCTAAATAGATCAGGAAGCAGGCAGCAGGGCTATTGAAGGTAAGAGCACTTGAAACA
GCAGTTGTGGGAGGACAAGGTATGTGTGACGCGCACACCACTGTGCCCAGGAATAAAGCT
CCCAGGCTGGGCCAGGCAGGTGCCCTTGAAGATTCTTTCTGTGCCCCTGAATCAGCCCAC
TCCACTCAGGGCTGCACCACCTTCTGGTTCAAACCCAGGCAGGACACTATCAGAAAATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATTTCAAAGCAGGCAGAGGGGATAGGAGCAAAAAGCTGAAATTTAGAAAAGCTTTACC
TTTATCTCTTCCCTTTTCTTCTCTCTCTTCTTCCCCACACCCCATACCCACTTTTTGAAG
AAAGTCTTGGTAGTCATCCTGGCTTTGGAAAAGAGATTTGTTTAGTTTCACTCTGCTGGC
TCTGCAAAGATGGATAGAGCTGCTCAGGTGGCAGTGATACTCTTGGAATTGCTGGGAAAT
TTAGGGAGGGAGGTGGTGGAAGATGGGGGTAGAATTCTTGTCTAACTTCCCTTTATCTAA
CGCTTATAAAGAGAGCTAGTACAGCCTATTTGAGTTTAGATGATACTTAGTTGTTTTGTC
ACTTGTAAAGGATAAGCATTTTCAAGAACAGGATTACACAGAAACTCAAAGACCCTCCTT
TATTCTTCCATGGAGCTGTGTTATTCCAAAATGTTTTACATCCGGGCCCTAGGGAGTTGA
GTAGTTCATTGTTTCGGTGTGCCATTGATGGGACACAGGGGGAGTGGGGAGAAATGTATA
GCTCTCCATATTCATTCCATCAAGAACTGGTCAGGTTGCAGAACTTCACGAAGGCTTTAC
TAATAATCTTATTGCTCTGACATTATATAAAAGTAGTATTAAGAGTGTGTGACTTTTCCA
AGTGCTAAATAGATCAGGAAGCAGGCAGCAGGGCTATTGAAGGTAAGAGCACTTGAAACA
GCAGTTGTGGGAGGACAAGGTATGTGTGACGCGCACACCACTGTGCCCAGGAATAAAGCT
CCCAGGCTGGGCCAGGCAGGTGCCCTTGAAGATTCTTTCTGTGCCCCTGAATCAGCCCAC
TCCACTCAGGGCTGCACCACCTTCTGGTTCAAACCCAGGCAGGACACTATCAGAAAATTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               4-861, gnl|bosTau2|chr3 (106168-107023)
               

               
               4-861, gnl|Hg17|chr1 (164123680-164124536)
               

               
               4-861, gnl|Mm7|chr1 (165840168-165839409)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-861, gnl|bosTau2|chr3 (106168-107023)
               

               
               4-861, gnl|Hg17|chr1 (164123680-164124536)
               

               
               4-861, gnl|Mm7|chr1 (165840168-165839409)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cki (0.165235)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)

	4-861, gnl\|bosTau2\|chr3 (106168-107023)
	4-861, gnl\|Hg17\|chr1 (164123680-164124536)
	4-861, gnl\|Mm7\|chr1 (165840168-165839409)