Non-Coding RNA Search

Ss1.1-Pig4-TMW8002I23.5

Sequence:


               
               GTGGACCCTAGAGGTGGCCCAGGCAGGCACTGAGGTGCCTTTGGTGGGTATGCTGGGCTG
GTGGCCAGTTATGGCTGGAGTTGGATAACAGTTGTGGATATTCAAGTATTTGGAAACAAG
AGTCCAATGTTAAAATGGCAGCCATAGCCTAGGAAACAATTTGCACTTGCCCTTTAACAT
GCTTAACTTTCAGCCATTTAAATGATGCCGAAGTGATTCTTTTTTCTAAGCCCTTGTCAT
GTGACTGCAAGTAACTGTAGCACCAATTTAGAGAAAACTCATTCTCGGCCCAGCCCAGGG
AAGGAGTGGCCTACAAGGATGAGGTCGGCAAGGCAATCCCTGGGAGACACTGCTGCCTTT
CCCCCGGGGCCTGGGTGCTCACCTAAGACTTGGGCGTTCAGCTGTTTTCCTAACAGCAAG
GCTTCTGACTTGGGGTTTTTACTCACACGGTCTTCCCAGCAGTTCTATTTATATCAGCAT
ATCCGAGTTGGGACTGACATTCCTCAAGGACATTAAAGCTACTGGAAAGGTCTTAATTCC
AACCCGTAAGGGATCATCTGTACAACATGCTGGTGGACTCGGCTTCAAGAACCCGGCTGT
CTGGACACATTTCAGACATCTGTGGGTGATTTTTAAGATGCATGCCAAACGTGTGTTTTG
CTTTCTCCAATGATTTGTAATATACCTTTTATGACTGGAAACTTTTATACAACACTCCAA
TAAACATTTTGGTTTTAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGACCCTAGAGGTGGCCCAGGCAGGCACTGAGGTGCCTTTGGTGGGTATGCTGGGCTG
GTGGCCAGTTATGGCTGGAGTTGGATAACAGTTGTGGATATTCAAGTATTTGGAAACAAG
AGTCCAATGTTAAAATGGCAGCCATAGCCTAGGAAACAATTTGCACTTGCCCTTTAACAT
GCTTAACTTTCAGCCATTTAAATGATGCCGAAGTGATTCTTTTTTCTAAGCCCTTGTCAT
GTGACTGCAAGTAACTGTAGCACCAATTTAGAGAAAACTCATTCTCGGCCCAGCCCAGGG
AAGGAGTGGCCTACAAGGATGAGGTCGGCAAGGCAATCCCTGGGAGACACTGCTGCCTTT
CCCCCGGGGCCTGGGTGCTCACCTAAGACTTGGGCGTTCAGCTGTTTTCCTAACAGCAAG
GCTTCTGACTTGGGGTTTTTACTCACACGGTCTTCCCAGCAGTTCTATTTATATCAGCAT
ATCCGAGTTGGGACTGACATTCCTCAAGGACATTAAAGCTACTGGAAAGGTCTTAATTCC
AACCCGTAAGGGATCATCTGTACAACATGCTGGTGGACTCGGCTTCAAGAACCCGGCTGT
CTGGACACATTTCAGACATCTGTGGGTGATTTTTAAGATGCATGCCAAACGTGTGTTTTG
CTTTCTCCAATGATTTGTAATATACCTTTTATGACTGGAAACTTTTATACAACACTCCAA
TAAACATTTTGGTTTTAAAAAAAA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               86-304, gnl|bosTau2|chr7 (17934401-17934614)
               

               
               86-304, gnl|Hg17|chr19 (2379823-2379611)
               


               
               391-739, gnl|bosTau2|chr7 (17934658-17935002)
               

               
               391-739, gnl|Hg17|chr19 (2379517-2379162)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-304, gnl|bosTau2|chr7 (17934401-17934614)
               

               
               86-304, gnl|Hg17|chr19 (2379823-2379611)
               


               
               391-739, gnl|bosTau2|chr7 (17934658-17935002)
               

               
               391-739, gnl|Hg17|chr19 (2379517-2379162)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               fbs (0.175346)
               

               
               csk (0.140746)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               csk (0.140746)
               

               
               cty (0.10408)

	86-304, gnl\|bosTau2\|chr7 (17934401-17934614)
	86-304, gnl\|Hg17\|chr19 (2379823-2379611)

	391-739, gnl\|bosTau2\|chr7 (17934658-17935002)
	391-739, gnl\|Hg17\|chr19 (2379517-2379162)