Non-Coding RNA Search

Ss1.1-Pig4-TMW8002L24.5

Sequence:


               
               TATGATCAATACATCAATATCGGCATTAACCCTAAGAAACTTGTAATGGGTATTCCTTGG
TATGGTTATGATTATACCTGCAAAACTCTATCAGAGCATCATGTTTGTACCACTGCAAAA
CTCCCTTGTAAAGATGCTGTACACAGACAGGTACCCTATCAAATAATTATGAAGCAACTA
AATAATTCTTATTCTGGAAGCCTGTGGGATGAAAATCAGAAGTCTCCTTATTATCACTAT
CAAGATCAGGCTGGGAATTTTCATCAAGTGTGGTATGATAACCCTCGGAGCATTTCTCTA
AAGGCAGCTTATGTACAAAGCCATGGCTTGCTCGGCATTGGCATGTGGCATGCAAGCTGT
CTTGACTACTCTGGAAATGCTTTAGCCAAACAGCAAACTGAAGAAATGTGGAAAGCCTTA
AAACCAAAGCTGTAACAGAAATGAACTTTTGTCAAACTTGTAAGATTTAGAAAAACATGT
TTAAATAGATGTAGTTTCTTAAAGAGATTAAAAAATGTATACATTTTTGTCACATTGCTA
AATATTTTAGTTATAAGTATATTCAAAAACATAAAGAAATGCTTTATTTGAATTTGAAAA
ATACATACCTGTTTATATCTTCAGTGTACAACAACATAAAGGTAAGAAGTAAGTCAACTT
TCTATATTAAATATTCCTCTGTAAGATGTTTAATACTGTAATTTGGAACAATTGCTTTTG
GAATTGTACTAAAAATTCTCCTATGATATTAAAGTATATGCTTACAAATCAGTGCTAGTT
TTTGGAATGTGTATAACTTGAAATTGTTTGCTTAGAATTAGATTTTTTTAAAACCTAGTC
TTTGAGAATCAGTTTGCTCTGTACTTTTTATTCAATAAACCTAAGTTTAAACCCTGAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGATCAATACATCAATATCGGCATTAACCCTAAGAAACTTGTAATGGGTATTCCTTGG
TATGGTTATGATTATACCTGCAAAACTCTATCAGAGCATCATGTTTGTACCACTGCAAAA
CTCCCTTGTAAAGATGCTGTACACAGACAGGTACCCTATCAAATAATTATGAAGCAACTA
AATAATTCTTATTCTGGAAGCCTGTGGGATGAAAATCAGAAGTCTCCTTATTATCACTAT
CAAGATCAGGCTGGGAATTTTCATCAAGTGTGGTATGATAACCCTCGGAGCATTTCTCTA
AAGGCAGCTTATGTACAAAGCCATGGCTTGCTCGGCATTGGCATGTGGCATGCAAGCTGT
CTTGACTACTCTGGAAATGCTTTAGCCAAACAGCAAACTGAAGAAATGTGGAAAGCCTTA
AAACCAAAGCTGTAACAGAAATGAACTTTTGTCAAACTTGTAAGATTTAGAAAAACATGT
TTAAATAGATGTAGTTTCTTAAAGAGATTAAAAAATGTATACATTTTTGTCACATTGCTA
AATATTTTAGTTATAAGTATATTCAAAAACATAAAGAAATGCTTTATTTGAATTTGAAAA
ATACATACCTGTTTATATCTTCAGTGTACAACAACATAAAGGTAAGAAGTAAGTCAACTT
TCTATATTAAATATTCCTCTGTAAGATGTTTAATACTGTAATTTGGAACAATTGCTTTTG
GAATTGTACTAAAAATTCTCCTATGATATTAAAGTATATGCTTACAAATCAGTGCTAGTT
TTTGGAATGTGTATAACTTGAAATTGTTTGCTTAGAATTAGATTTTTTTAAAACCTAGTC
TTTGAGAATCAGTTTGCTCTGTACTTTTTATTCAATAAACCTAAGTTTAAACCCTGAAAA
AAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55664669|emb|CAH70206.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55664669|emb|CAH70206.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               241-879, gnl|bosTau2|chr3 (45013419-45014080)
               

               
               241-879, gnl|Hg17|chr1 (84732906-84732260)
               

               
               241-879, gnl|Mm7|chr3 (146362455-146363212)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               241-879, gnl|bosTau2|chr3 (45013419-45014080)
               

               
               241-879, gnl|Hg17|chr1 (84732906-84732260)
               

               
               241-879, gnl|Mm7|chr3 (146362455-146363212)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               lyg (0.266205)
               

               
               pla (0.133672)
               

               
               ute (0.132784)
               

               
               pgl (0.118483)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.266205)
               

               
               pla (0.133672)
               

               
               ute (0.132784)
               

               
               pgl (0.118483)

	241-879, gnl\|bosTau2\|chr3 (45013419-45014080)
	241-879, gnl\|Hg17\|chr1 (84732906-84732260)
	241-879, gnl\|Mm7\|chr3 (146362455-146363212)