Non-Coding RNA Search

Ss1.1-Pig4-TMW8003B08.3

Sequence:


               
               ATGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAAAAGGACAAGCCACTTTGCAA
GAAACATGCTCATTCTGTGAATTTTTGAGAGTCTGCAATTCAGGAGAAGAGAAGACATTT
GAAGACAAAGAGGAGAATTAAAATTACCAATTAATTTTTAGATTTAATATTTATATGGAG
TTTTGAAAAATAATAGTAGCCCTGAAGGGATAAATTCCAAGCTTTGAAAACCAAGTCTAT
GAGGAAATATTTGGCTTCATAAAGCAAAGAGACAGTTTGGCATTTATTATTACTTCTTTC
CTGTATTTTCTGCCCATAAAATAACTTCTATAAAAACCAATTTCCTGGTTGACTATTAAA
TTCATCTTAGAATAAATTAGCGAAGAATTAAATTTTAGAATAAAAACCTTCAATCTCTAT
GCTGAAATAATGATACTCTCTTTCCTTAGGTAGTTACGAGTACATCTATACAAGGCAATG
AACATACCTTACACTTAATAAATGAAACATTGTGTTTCTTAAAAAATTAGTGCTTATCTT
TAAAACAGTAAATAGGAGTTTAAACAGAGAATTTTATCAGAGTAGGTGTCCGGTTCTTTT
TGAAACTGTACTTATTTTTTGTCTTTACAGTTGGTCATTCCAATAGGAAAGGCCATTGAG
ATTTTGATCGAAATGGGTCATGCCCACAAGAGATGTTATATTTTTCTCTGATCCTCCCAC
CCCCAAAAGCCACCATAGAGGTTATCATTTTCAAATGTTTGCCTTCTATTAAAATACAAC
TGTTTCTGTTCATTGTGTATGTTTGATCACCTATATTAGTAAAACTTTCTATTTTTCCTC
TCTGCCATGCTGAGGTAAAGAACTAGTTGAGTAACTTTGGTCTCTGACCCTGTTCCCTCT
CTCTTTAAAGAGAATAAATAGAAAAGAATGTGGTCAAGAATTATGGTAAACCAGAGGGCT
GGATCAAAAAATTTTTTAAATTCTCCCCTTTCGGACAATGAATCACTTAGGTTAGTTTCA
GAGTGTTACTTACCACTGGCTGATGAAGGTTTGAAAGTTCTCTTTGCAGAATAGTTTTTT
TCTTCAGTTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTTGTGAAAGTTTGGAAGGTCAGACCTTTTTCTCCAAAAAGGACAAGCCACTTTGCAA
GAAACATGCTCATTCTGTGAATTTTTGAGAGTCTGCAATTCAGGAGAAGAGAAGACATTT
GAAGACAAAGAGGAGAATTAAAATTACCAATTAATTTTTAGATTTAATATTTATATGGAG
TTTTGAAAAATAATAGTAGCCCTGAAGGGATAAATTCCAAGCTTTGAAAACCAAGTCTAT
GAGGAAATATTTGGCTTCATAAAGCAAAGAGACAGTTTGGCATTTATTATTACTTCTTTC
CTGTATTTTCTGCCCATAAAATAACTTCTATAAAAACCAATTTCCTGGTTGACTATTAAA
TTCATCTTAGAATAAATTAGCGAAGAATTAAATTTTAGAATAAAAACCTTCAATCTCTAT
GCTGAAATAATGATACTCTCTTTCCTTAGGTAGTTACGAGTACATCTATACAAGGCAATG
AACATACCTTACACTTAATAAATGAAACATTGTGTTTCTTAAAAAATTAGTGCTTATCTT
TAAAACAGTAAATAGGAGTTTAAACAGAGAATTTTATCAGAGTAGGTGTCCGGTTCTTTT
TGAAACTGTACTTATTTTTTGTCTTTACAGTTGGTCATTCCAATAGGAAAGGCCATTGAG
ATTTTGATCGAAATGGGTCATGCCCACAAGAGATGTTATATTTTTCTCTGATCCTCCCAC
CCCCAAAAGCCACCATAGAGGTTATCATTTTCAAATGTTTGCCTTCTATTAAAATACAAC
TGTTTCTGTTCATTGTGTATGTTTGATCACCTATATTAGTAAAACTTTCTATTTTTCCTC
TCTGCCATGCTGAGGTAAAGAACTAGTTGAGTAACTTTGGTCTCTGACCCTGTTCCCTCT
CTCTTTAAAGAGAATAAATAGAAAAGAATGTGGTCAAGAATTATGGTAAACCAGAGGGCT
GGATCAAAAAATTTTTTAAATTCTCCCCTTTCGGACAATGAATCACTTAGGTTAGTTTCA
GAGTGTTACTTACCACTGGCTGATGAAGGTTTGAAAGTTCTCTTTGCAGAATAGTTTTTT
TCTTCAGTTCTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-1084, gnl|bosTau2|chr6 (12792782-12791703)
               

               
               2-1084, gnl|Hg17|chr4 (95942310-95944013)
               

               
               2-1084, gnl|Mm7|chr3 (142135708-142134703)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-1084, gnl|bosTau2|chr6 (12792782-12791703)
               

               
               2-1084, gnl|Hg17|chr4 (95942310-95944013)
               

               
               2-1084, gnl|Mm7|chr3 (142135708-142134703)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mga (0.160205)
               

               
               ova (0.129132)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)
               

               
               ova (0.129132)
               

               
               tra (0.123092)

	2-1084, gnl\|bosTau2\|chr6 (12792782-12791703)
	2-1084, gnl\|Hg17\|chr4 (95942310-95944013)
	2-1084, gnl\|Mm7\|chr3 (142135708-142134703)