Non-Coding RNA Search

Ss1.1-Pig4-TMW8003C06.5

Sequence:


               
               TACTTAGGTCCTTTCTCTTTGGAGTTTAAATACCAAATTATTTTGCATCAAATGGGAACA
CTTTTTCCAAATATAGTTGTATGCACTTGGAAAAAACATTTAAATATGCTTGTTAATAGG
AACATATATGATTAAACAACCTATTGTGCATATTTCTATAACCGCAAGGAACCAGGAGTG
GGATGAAATGGCATTCCTTTAAATTCAGGACTTTATCTGGAGAAAGGTGTTTTAAGAAGT
TCAGCACATGTGCTGAGGAAAGAGTTGGTCTGAAAGATAAGCCACTGAAAAGAATGAAAT
TGACCTATTCATAGTAAAAGTAAAGAAGTTTTTTTTTTTTTTTTTAAGGATACATTTAAC
AAGAGGGAAAACCAGAGGATTTAAAGCAGAACTAATCTATAATTTTCTAAAGTGAATACA
ATTCTCTGTTTATAAGAAGCTGGAAAGTCATTTACCTTGATTGCAGTAGGAATGATTTAT
GTGTTGCAACTTTAATTTATTTAAAGCGTTTTGACTCTATTTGTCCTCAAATGTTTCAAC
AAAAGTGTGCTCTCTGTTTAAGGTATGTTTAGGCAGTAGTGAGCGGCTCTAAGCGAAGAA
ACTGGAAATGTTTATTATGAGGTCTGTTGGAAATTTCTGTTTTGTGGGATATCCTATAGT
TTCTTGTCAGCCTAAAATGGTCAGTTCTCTGTAGCTCTTCACCCCATTCAAAGCAGGTGC
CATTATTTTTTAAAAGAAACACTTCATGTTGCTTTGATGTTAAATAAAGAGCTAGATTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTTAGGTCCTTTCTCTTTGGAGTTTAAATACCAAATTATTTTGCATCAAATGGGAACA
CTTTTTCCAAATATAGTTGTATGCACTTGGAAAAAACATTTAAATATGCTTGTTAATAGG
AACATATATGATTAAACAACCTATTGTGCATATTTCTATAACCGCAAGGAACCAGGAGTG
GGATGAAATGGCATTCCTTTAAATTCAGGACTTTATCTGGAGAAAGGTGTTTTAAGAAGT
TCAGCACATGTGCTGAGGAAAGAGTTGGTCTGAAAGATAAGCCACTGAAAAGAATGAAAT
TGACCTATTCATAGTAAAAGTAAAGAAGTTTTTTTTTTTTTTTTTAAGGATACATTTAAC
AAGAGGGAAAACCAGAGGATTTAAAGCAGAACTAATCTATAATTTTCTAAAGTGAATACA
ATTCTCTGTTTATAAGAAGCTGGAAAGTCATTTACCTTGATTGCAGTAGGAATGATTTAT
GTGTTGCAACTTTAATTTATTTAAAGCGTTTTGACTCTATTTGTCCTCAAATGTTTCAAC
AAAAGTGTGCTCTCTGTTTAAGGTATGTTTAGGCAGTAGTGAGCGGCTCTAAGCGAAGAA
ACTGGAAATGTTTATTATGAGGTCTGTTGGAAATTTCTGTTTTGTGGGATATCCTATAGT
TTCTTGTCAGCCTAAAATGGTCAGTTCTCTGTAGCTCTTCACCCCATTCAAAGCAGGTGC
CATTATTTTTTAAAAGAAACACTTCATGTTGCTTTGATGTTAAATAAAGAGCTAGATTTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-780, gnl|bosTau2|chr5 (18010073-18010840)
               

               
               3-780, gnl|Hg17|chr12 (93464160-93463377)
               

               
               3-780, gnl|Mm7|chr10 (94150834-94151654)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-780, gnl|bosTau2|chr5 (18010073-18010840)
               

               
               3-780, gnl|Hg17|chr12 (93464160-93463377)
               

               
               3-780, gnl|Mm7|chr10 (94150834-94151654)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               col (0.195008)
               

               
               sag (0.182715)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               sag (0.182715)
               

               
               tra (0.123092)

	3-780, gnl\|bosTau2\|chr5 (18010073-18010840)
	3-780, gnl\|Hg17\|chr12 (93464160-93463377)
	3-780, gnl\|Mm7\|chr10 (94150834-94151654)