Ss1.1-Pig4-TMW8003D20.3
|
CTTTATAAGGAAGGTCAGCTTTGCCAAGTTCTTGCAGTCGTTCCGTGAACCAGAACATTC
CCAGTGAAAGATGGCGGAGAATTCGATCTTGCTGGCTGTTCTCTCGCTCCTCTCTGCCTG
TCAGCAAAGTTATTTTGCTTTGCAGGTAGGAAAGGCAAGATTAAAATACAAAGTGATGCC
TCCGGCTGTCTCTGGGTCGCCAGAGTTTGAGAGAATATTTCGTGCACAACAAAACTCTTT
AGAGTTTTACCCAGTATTCATTATTACATTGTGGGTGGCTGGATGGTATTTCAACCAAGT
TTTTGCCACTTGTCTGGGTCTGGTGTACATCTATGCCCGTCACCGGTATTTTTGGGGATA
TTCAGAAGCTCCTAAAAAAAGGATCACTGGTTTCCGGTTAAGTCTGGGGGTTTTGGCCTT
GTTGGCCGTCCTAGGTGCTGTGGGGATTACAAACAGCTTTCTGGATGAATATCTGGACCT
CAATATTGCCAAGAAACTGAGGCACTTCTAAAGTGGCCCTCTCCTTTCGCTCAAATGCCT
GCAGAAGATGTTTCTACTCTGAAGGTTAGATGGTCTCTCTTGTTCAATTAAAAGCAATAA
AAATCCCTATTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTTTATAAGGAAGGTCAGCTTTGCCAAGTTCTTGCAGTCGTTCCGTGAACCAGAACATTC
CCAGTGAAAGATGGCGGAGAATTCGATCTTGCTGGCTGTTCTCTCGCTCCTCTCTGCCTG
TCAGCAAAGTTATTTTGCTTTGCAGGTAGGAAAGGCAAGATTAAAATACAAAGTGATGCC
TCCGGCTGTCTCTGGGTCGCCAGAGTTTGAGAGAATATTTCGTGCACAACAAAACTCTTT
AGAGTTTTACCCAGTATTCATTATTACATTGTGGGTGGCTGGATGGTATTTCAACCAAGT
TTTTGCCACTTGTCTGGGTCTGGTGTACATCTATGCCCGTCACCGGTATTTTTGGGGATA
TTCAGAAGCTCCTAAAAAAAGGATCACTGGTTTCCGGTTAAGTCTGGGGGTTTTGGCCTT
GTTGGCCGTCCTAGGTGCTGTGGGGATTACAAACAGCTTTCTGGATGAATATCTGGACCT
CAATATTGCCAAGAAACTGAGGCACTTCTAAAGTGGCCCTCTCCTTTCGCTCAAATGCCT
GCAGAAGATGTTTCTACTCTGAAGGTTAGATGGTCTCTCTTGTTCAATTAAAAGCAATAA
AAATCCCTATTT
|
|
380-608, gnl|bosTau2|chr17 (12469824-12469597) |
|
380-608, gnl|canFam2|chr19 (6068165-6067939) |
|
380-608, gnl|echTel1|scaffold_302943 (9141-8914) |
|
380-608, gnl|galGal2|chr4 (29859536-29859778) |
|
380-608, gnl|hg17|chr4 (140982736-140982962) |
|
380-608, gnl|Hg17|chr4 (140982773-140982999) |
|
380-608, gnl|loxAfr1|scaffold_10008 (15876-16102) |
|
380-608, gnl|mm7|chr3 (51807034-51807260) |
|
380-608, gnl|Mm7|chr3 (51807071-51807290) |
|
380-608, gnl|monDom2|scaffold_9 (7246288-7246516) |
|
380-608, gnl|oryCun1|scaffold_202797 (103422-103196) |
|
380-608, gnl|panTro1|chr3 (158237332-158237558) |
|
380-608, gnl|rheMac2|chr5 (132171787-132172013) |
|
380-608, gnl|rn3|chr2 (140518311-140518537) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
380-608, gnl|bosTau2|chr17 (12469824-12469597) |
|
380-608, gnl|canFam2|chr19 (6068165-6067939) |
|
380-608, gnl|echTel1|scaffold_302943 (9141-8914) |
|
380-608, gnl|galGal2|chr4 (29859536-29859778) |
|
380-608, gnl|hg17|chr4 (140982736-140982962) |
|
380-608, gnl|Hg17|chr4 (140982773-140982999) |
|
380-608, gnl|loxAfr1|scaffold_10008 (15876-16102) |
|
380-608, gnl|mm7|chr3 (51807034-51807260) |
|
380-608, gnl|Mm7|chr3 (51807071-51807290) |
|
380-608, gnl|monDom2|scaffold_9 (7246288-7246516) |
|
380-608, gnl|oryCun1|scaffold_202797 (103422-103196) |
|
380-608, gnl|panTro1|chr3 (158237332-158237558) |
|
380-608, gnl|rheMac2|chr5 (132171787-132172013) |
|
380-608, gnl|rn3|chr2 (140518311-140518537) |
|
sin (0.69979) |
|
duo (0.691204) |
|
jej (0.395687) |
|
hea (0.204499) |
|
mgm (0.180343) |
|
ill (0.175593) |
|
ton (0.1755) |
|
nco (0.161734) |
|
mga (0.160205) |
|
cli (0.152812) |
|
fat (0.147427) |
|
ski (0.146735) |
|
pty (0.142714) |
|
ssp (0.13552) |
|
pla (0.133672) |
|
bla (0.124347) |
|
pgl (0.118483) |
|
spc (0.113366) |
|
eje (0.0988338) |
|
ldo (0.0970026) |
|
sin (0.69979) |
|
duo (0.691204) |
|
jej (0.395687) |
|
hea (0.204499) |
|
mgm (0.180343) |
|
ill (0.175593) |
|
ton (0.1755) |
|
nco (0.161734) |
|
mga (0.160205) |
|
cli (0.152812) |
|
fat (0.147427) |
|
ski (0.146735) |
|
pty (0.142714) |
|
ssp (0.13552) |
|
pla (0.133672) |
|
bla (0.124347) |
|
pgl (0.118483) |
|
spc (0.113366) |
|
eje (0.0988338) |
|
ldo (0.0970026) |
