Ss1.1-Pig4-TMW8003F23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCACTCAAGCTAAGAAATCTCAGGCAATTGCCAGCGACGTGGACTATAAGCACCTCTT ACACAACTATAGCTACCCGCCTGATAGCATCAACGTGGACCTCGCCAAGAAGGCTTATGC GCTGCAGAGCGATGTTGAATACAAAGCTGACTACAACAGCTGGATGAAAGGTTGTGGCTG GATACCTTTTGGGTCCTTGGAAATGGAAAAGGCAAAGCGAGCTTCAGACATTCTGAATGA GAAAAAATATCGCCAACATCCAGAAACTCTCAAGTTTACTTCAATTGAAGATGCTCCGAT TATAGTACAATCAAAAATTAACCAGGCCCAGAGGAGTGATATTGCCTACAAAGCCAAAGG AGAGGAAATTATCCACAAGTACAGCCTGCCGGCGGACCTGCCCCAATTCATTCAGGCGAA AGTGAATGCCTACAATATCAGTGAGAGTATGTACAAAGCAGACTTGAAAGATCTGAGCAA GAAGGGATATGACCTGAGAACCGATGCAATTCCTATCAAAGCTGCCAAAGCTGCCAGGCA GGCGGCAAGTGACGTTCAATACAAAAAAGATTATGAAAAAGCCAAAGGGAAAATGGTTGG CTTCCAAAGTCTCCAAGATGACCCTAAACTGGTTCATTATATGAATGTGGCCAAGATCCA ATCAGACCGCGAGTATAAGAAAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCACTCAAGCTAAGAAATCTCAGGCAATTGCCAGCGACGTGGACTATAAGCACCTCTT ACACAACTATAGCTACCCGCCTGATAGCATCAACGTGGACCTCGCCAAGAAGGCTTATGC GCTGCAGAGCGATGTTGAATACAAAGCTGACTACAACAGCTGGATGAAAGGTTGTGGCTG GATACCTTTTGGGTCCTTGGAAATGGAAAAGGCAAAGCGAGCTTCAGACATTCTGAATGA GAAAAAATATCGCCAACATCCAGAAACTCTCAAGTTTACTTCAATTGAAGATGCTCCGAT TATAGTACAATCAAAAATTAACCAGGCCCAGAGGAGTGATATTGCCTACAAAGCCAAAGG AGAGGAAATTATCCACAAGTACAGCCTGCCGGCGGACCTGCCCCAATTCATTCAGGCGAA AGTGAATGCCTACAATATCAGTGAGAGTATGTACAAAGCAGACTTGAAAGATCTGAGCAA GAAGGGATATGACCTGAGAACCGATGCAATTCCTATCAAAGCTGCCAAAGCTGCCAGGCA GGCGGCAAGTGACGTTCAATACAAAAAAGATTATGAAAAAGCCAAAGGGAAAATGGTTGG CTTCCAAAGTCTCCAAGATGACCCTAAACTGGTTCATTATATGAATGTGGCCAAGATCCA ATCAGACCGCGAGTATAAGAAAGA |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 3-135, gnl|bosTau2|chr2 (29614198-29614330) | |
| 3-135, gnl|canFam2|chr19 (55910474-55910691) | |
| 3-135, gnl|danRer3|chr9 (14950020-14949812) | |
| 3-135, gnl|dasNov1|scaffold_185 (159989-160206) | |
| 3-135, gnl|echTel1|scaffold_265445 (6333-6116) | |
| 3-135, gnl|fr1|chrUn (158663738-158663955) | |
| 3-135, gnl|hg17|chr2 (152366791-152367008) | |
| 3-135, gnl|Hg17|chr2 (152366930-152366798) | |
| 3-135, gnl|loxAfr1|scaffold_239 (123662-123879) | |
| 3-135, gnl|mm7|chr2 (52303541-52303757) | |
| 3-135, gnl|Mm7|chr2 (52303680-52303548) | |
| 3-135, gnl|monDom2|scaffold_2 (42685173-42685390) | |
| 3-135, gnl|oryCun1|scaffold_187887 (66033-65816) | |
| 3-135, gnl|panTro1|chr13 (41431609-41431826) | |
| 3-135, gnl|rheMac2|chr12 (15362400-15362617) | |
| 3-135, gnl|rn3|chr3 (33693362-33693578) | |
| 3-135, gnl|tetNig1|chr2 (18027912-18028122) | |
| 3-135, gnl|xenTro1|scaffold_524 (28250-28463) | |
| 554-683, gnl|bosTau2|chr2 (29621432-29621561) | |
| 554-683, gnl|canFam2|chr19 (55903137-55903489) | |
| 554-683, gnl|danRer3|chr9 (14952988-14952649) | |
| 554-683, gnl|dasNov1|scaffold_185 (171156-171511) | |
| 554-683, gnl|echTel1|scaffold_318019 (7716-7391) | |
| 554-683, gnl|fr1|chrUn (158662473-158662799) | |
| 554-683, gnl|galGal2|chr7 (35928623-35928954) | |
| 554-683, gnl|hg17|chr2 (152359874-152360227) | |
| 554-683, gnl|Hg17|chr2 (152360209-152360080) | |
| 554-683, gnl|loxAfr1|scaffold_239 (87839-88173) | |
| 554-683, gnl|mm7|chr2 (52298331-52298682) | |
| 554-683, gnl|Mm7|chr2 (52298664-52298535) | |
| 554-683, gnl|monDom2|scaffold_2 (42675545-42675898) | |
| 554-683, gnl|oryCun1|scaffold_187887 (73415-73062) | |
| 554-683, gnl|panTro1|chr13 (41424694-41425047) | |
| 554-683, gnl|rheMac2|chr12 (15355474-15355827) | |
| 554-683, gnl|rn3|chr3 (33686481-33686830) | |
| 554-683, gnl|tetNig1|chr2 (18026675-18027008) | |
| 554-683, gnl|xenTro1|scaffold_494 (813534-813883) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-135, gnl|bosTau2|chr2 (29614198-29614330) | |
| 3-135, gnl|canFam2|chr19 (55910474-55910691) | |
| 3-135, gnl|danRer3|chr9 (14950020-14949812) | |
| 3-135, gnl|dasNov1|scaffold_185 (159989-160206) | |
| 3-135, gnl|echTel1|scaffold_265445 (6333-6116) | |
| 3-135, gnl|fr1|chrUn (158663738-158663955) | |
| 3-135, gnl|hg17|chr2 (152366791-152367008) | |
| 3-135, gnl|Hg17|chr2 (152366930-152366798) | |
| 3-135, gnl|loxAfr1|scaffold_239 (123662-123879) | |
| 3-135, gnl|mm7|chr2 (52303541-52303757) | |
| 3-135, gnl|Mm7|chr2 (52303680-52303548) | |
| 3-135, gnl|monDom2|scaffold_2 (42685173-42685390) | |
| 3-135, gnl|oryCun1|scaffold_187887 (66033-65816) | |
| 3-135, gnl|panTro1|chr13 (41431609-41431826) | |
| 3-135, gnl|rheMac2|chr12 (15362400-15362617) | |
| 3-135, gnl|rn3|chr3 (33693362-33693578) | |
| 3-135, gnl|tetNig1|chr2 (18027912-18028122) | |
| 3-135, gnl|xenTro1|scaffold_524 (28250-28463) | |
| 554-683, gnl|bosTau2|chr2 (29621432-29621561) | |
| 554-683, gnl|canFam2|chr19 (55903137-55903489) | |
| 554-683, gnl|danRer3|chr9 (14952988-14952649) | |
| 554-683, gnl|dasNov1|scaffold_185 (171156-171511) | |
| 554-683, gnl|echTel1|scaffold_318019 (7716-7391) | |
| 554-683, gnl|fr1|chrUn (158662473-158662799) | |
| 554-683, gnl|galGal2|chr7 (35928623-35928954) | |
| 554-683, gnl|hg17|chr2 (152359874-152360227) | |
| 554-683, gnl|Hg17|chr2 (152360209-152360080) | |
| 554-683, gnl|loxAfr1|scaffold_239 (87839-88173) | |
| 554-683, gnl|mm7|chr2 (52298331-52298682) | |
| 554-683, gnl|Mm7|chr2 (52298664-52298535) | |
| 554-683, gnl|monDom2|scaffold_2 (42675545-42675898) | |
| 554-683, gnl|oryCun1|scaffold_187887 (73415-73062) | |
| 554-683, gnl|panTro1|chr13 (41424694-41425047) | |
| 554-683, gnl|rheMac2|chr12 (15355474-15355827) | |
| 554-683, gnl|rn3|chr3 (33686481-33686830) | |
| 554-683, gnl|tetNig1|chr2 (18026675-18027008) | |
| 554-683, gnl|xenTro1|scaffold_494 (813534-813883) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| vin (0.332557) | |
| isp (0.150376) | |
| ssp (0.13552) |