Non-Coding RNA Search

Ss1.1-Pig4-TMW8003K18.3

Sequence:


               
               AAAAAAAAAGATATCTTGAATCTGGTTCTGAGGCTAAAGTGAAGTAAACTCTTAGCTAAG
AAAAACTTGAAAATTTATCATCTATAAAAGTAAGAGATTTTCAAAGTAAATTCCATTAAC
TTCTATGATTTATAATTATCAAGCTGGACTTGATCATACAGGTAATCTAATAATGTATTG
GACCAAAATATTAACTTTCCTGGTCAGATTCAGAGGCATTCGTGATCACAAATTTGGGGG
AAAGTGACAAAATAAACTCTTGAATTTTATTCTGTATATTAAAACTTATCTTTTAAGGAA
GCAATCTGTACAGTACTTGCTTGTATGCCCTTTGACCTGTCTTGAGGTTTTCATAATTAT
TTAATTTTTATACTGTCAATGCCACATTTACATTATATATTTTAAATAACAATGTGAGTT
TCCCTGTGGTACTATTATAGATAGATATTAAGGTATATGATTCTGTTTTCATTTTAGCTC
TGCCATGATTATTGTGAAGTGTTTGGTACAATTAGTACTGCAAGACCCCTTGCCCTCCCA
GCTCCATAAACCTGTGGCCTCCAATATAGCAAGAAATAGACTTTGACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAAAAAGATATCTTGAATCTGGTTCTGAGGCTAAAGTGAAGTAAACTCTTAGCTAAG
AAAAACTTGAAAATTTATCATCTATAAAAGTAAGAGATTTTCAAAGTAAATTCCATTAAC
TTCTATGATTTATAATTATCAAGCTGGACTTGATCATACAGGTAATCTAATAATGTATTG
GACCAAAATATTAACTTTCCTGGTCAGATTCAGAGGCATTCGTGATCACAAATTTGGGGG
AAAGTGACAAAATAAACTCTTGAATTTTATTCTGTATATTAAAACTTATCTTTTAAGGAA
GCAATCTGTACAGTACTTGCTTGTATGCCCTTTGACCTGTCTTGAGGTTTTCATAATTAT
TTAATTTTTATACTGTCAATGCCACATTTACATTATATATTTTAAATAACAATGTGAGTT
TCCCTGTGGTACTATTATAGATAGATATTAAGGTATATGATTCTGTTTTCATTTTAGCTC
TGCCATGATTATTGTGAAGTGTTTGGTACAATTAGTACTGCAAGACCCCTTGCCCTCCCA
GCTCCATAAACCTGTGGCCTCCAATATAGCAAGAAATAGACTTTGACT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               8-587, gnl|bosTau2|chr15 (49575186-49574607)
               

               
               8-587, gnl|Hg17|chr11 (47756653-47756051)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-587, gnl|bosTau2|chr15 (49575186-49574607)
               

               
               8-587, gnl|Hg17|chr11 (47756653-47756051)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               lin (0.145603)

	8-587, gnl\|bosTau2\|chr15 (49575186-49574607)
	8-587, gnl\|Hg17\|chr11 (47756653-47756051)