Non-Coding RNA Search

Ss1.1-Pig4-TMW8003L02.3

Sequence:


               
               TTCTTTTGTTACCACTGAACTTCTGAGTTCCTTGAAGTAATCAAGTCTTGTGTTCCAGTT
TAATGTTAAGTAATAACACATAAAACTCTTTACCTGACAAACATTAAAAAAAAATTAAAC
AGGAGTTCCCACTGTGGTGCAGTGGAAATGAATCTGACTAGGAACCATGAGGTCGTGGGT
TTGAGTCTTGGCCCACTGATCGGGGCCAGGGATCGAACCTGTGTCCTCGGGGATGCTGGT
CGGATTCGTTGACCACTGGGCCATAATGGGAACTCCTTTTTCATTAATTCTTGACAAGCA
CATACATCATATACCTACAGGAATTACAAGAACTAGAATCTCTAAGAATTCTGCTTGTGT
CTTCTACAAGGTATATATCACTGAAGAGAAAAAGAATCAATTCAGTGTCCCTATAGAAAT
GAGGGTACAGTTATCAATTTTCAAGAATAATTTATAAGACTGAACTCATTTCCTCCTCTT
TTTTGAAATGTCATAACTGCAGTATAAGAATGATGGCAGCACAATTTCCACAGGTAACTT
CTACATTTATTTTATACCAAAAAAGTTATGTGCAACAAATAAACATTCTTACATATTTAC
ATTTGTTTTTACCAGTTAGCAAAACTGTGTCCTAAATCTCTGATAAAGAATATTTCTATC
TATATTAAAGGGGAAATCTGCCCAGTGAACTCCATTTTCAATGAATGTTTTACTCTGGAG
CTTAAAGCACTAGTAATAAATATTTTTGATGGAACATACTATACAGATCATACACCTAAT
ACTTAGGCCATGCTTAATACAGTTTTATAACAAAACATTTTACCTTTTCTGGGCTAATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTTTTGTTACCACTGAACTTCTGAGTTCCTTGAAGTAATCAAGTCTTGTGTTCCAGTT
TAATGTTAAGTAATAACACATAAAACTCTTTACCTGACAAACATTAAAAAAAAATTAAAC
AGGAGTTCCCACTGTGGTGCAGTGGAAATGAATCTGACTAGGAACCATGAGGTCGTGGGT
TTGAGTCTTGGCCCACTGATCGGGGCCAGGGATCGAACCTGTGTCCTCGGGGATGCTGGT
CGGATTCGTTGACCACTGGGCCATAATGGGAACTCCTTTTTCATTAATTCTTGACAAGCA
CATACATCATATACCTACAGGAATTACAAGAACTAGAATCTCTAAGAATTCTGCTTGTGT
CTTCTACAAGGTATATATCACTGAAGAGAAAAAGAATCAATTCAGTGTCCCTATAGAAAT
GAGGGTACAGTTATCAATTTTCAAGAATAATTTATAAGACTGAACTCATTTCCTCCTCTT
TTTTGAAATGTCATAACTGCAGTATAAGAATGATGGCAGCACAATTTCCACAGGTAACTT
CTACATTTATTTTATACCAAAAAAGTTATGTGCAACAAATAAACATTCTTACATATTTAC
ATTTGTTTTTACCAGTTAGCAAAACTGTGTCCTAAATCTCTGATAAAGAATATTTCTATC
TATATTAAAGGGGAAATCTGCCCAGTGAACTCCATTTTCAATGAATGTTTTACTCTGGAG
CTTAAAGCACTAGTAATAAATATTTTTGATGGAACATACTATACAGATCATACACCTAAT
ACTTAGGCCATGCTTAATACAGTTTTATAACAAAACATTTTACCTTTTCTGGGCTAATTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               446-838, gnl|bosTau2|chr25 (23686404-23686012)
               

               
               446-838, gnl|Hg17|chr7 (64867748-64867366)
               

               
               446-838, gnl|Mm7|chr5 (129224584-129224205)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               446-838, gnl|bosTau2|chr25 (23686404-23686012)
               

               
               446-838, gnl|Hg17|chr7 (64867748-64867366)
               

               
               446-838, gnl|Mm7|chr5 (129224584-129224205)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cly (0.120642)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)

	446-838, gnl\|bosTau2\|chr25 (23686404-23686012)
	446-838, gnl\|Hg17\|chr7 (64867748-64867366)
	446-838, gnl\|Mm7\|chr5 (129224584-129224205)