Non-Coding RNA Search

Ss1.1-Pig4-TMW8003L11.3

Sequence:


               
               CTTCACTCCGTCCTTTGCCAACCTTGGCCGACCAGCCCTTAGCAACCGTGGGCCCCCAGG
GGTGGGCCAGGTGGGGAGCTGCCCCGAGGGCCGGCTGGCCTGGGACCCCGGCGGTCTCAG
CAGGGTCCCCGAAAGGAACCACGCAAGATCATTGCCACAGTATCAATGACTGAAGACATA
AAGCTGAATAAAGCAGAGAAGGCCTGGAAACCCAGCAGCAAGCGGACGGCAGCCGATAAG
GACCGAGGGGAAGAGGATGCTGATGGCAGTAAAACCCAGGACCTGTTCCGCAGAGTGCGC
TCCATCCTAAATAAGCTGACACCCCAGATGTTCCAGCAGCTGATGAAGCAGGTGACGCAG
CTGGCCATCGACACTGAGGAACGGCTCAAGGGGGTCATTGACCTCATCTTTGAAAAGGCC
ATTTCAGAGCCCAACTTCTCCGTGGCCTATGCCAACATGTGCCGCTGCCTCATGGCGCTG
AAAGTGCCCACTACAGAAAAGCCAACAGTGACTGTGAACTTTCGAAAACTGTTGTTGAAT
CGATGTCAGAAGGAGTTTGAAAAAGACAAAGATGATGATGAGGTTTTTGAGAAGAAGCAA
AAAGAGATGGATGAAGCTGCCACGGCAGAAGAACGGGGACGCCTGAAGGAAGAGTGGGAA
GAAGCTCGAGACACAGCCCGGCGGCGCTCTTTAGGGGAATATCAAATTTATCGGGGAATG
GTTCAAACTGAAGATGTTAACAGAGGCAATCATGCACGACTGTGTGGTTAAACTCCTTAA
GAACCAGGATGAAGAGTCTCTTGAATGCCTTGGCCGTCTGCTCACCACCATGGGCAAAGA
CCTGGACTTTGAAAAGGCCAAGCCCCGAAGGGATCAGTATTTTAACCAGATGGAGAAAAT
CATTAAGGAAAAGAAGACTTCATCCCGAATCCGCTTTATGCTGCAAGATGTGCTGGATCT
GCGACGAAGCAATTGGGTCCCGCGCCGAGGGGACCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCACTCCGTCCTTTGCCAACCTTGGCCGACCAGCCCTTAGCAACCGTGGGCCCCCAGG
GGTGGGCCAGGTGGGGAGCTGCCCCGAGGGCCGGCTGGCCTGGGACCCCGGCGGTCTCAG
CAGGGTCCCCGAAAGGAACCACGCAAGATCATTGCCACAGTATCAATGACTGAAGACATA
AAGCTGAATAAAGCAGAGAAGGCCTGGAAACCCAGCAGCAAGCGGACGGCAGCCGATAAG
GACCGAGGGGAAGAGGATGCTGATGGCAGTAAAACCCAGGACCTGTTCCGCAGAGTGCGC
TCCATCCTAAATAAGCTGACACCCCAGATGTTCCAGCAGCTGATGAAGCAGGTGACGCAG
CTGGCCATCGACACTGAGGAACGGCTCAAGGGGGTCATTGACCTCATCTTTGAAAAGGCC
ATTTCAGAGCCCAACTTCTCCGTGGCCTATGCCAACATGTGCCGCTGCCTCATGGCGCTG
AAAGTGCCCACTACAGAAAAGCCAACAGTGACTGTGAACTTTCGAAAACTGTTGTTGAAT
CGATGTCAGAAGGAGTTTGAAAAAGACAAAGATGATGATGAGGTTTTTGAGAAGAAGCAA
AAAGAGATGGATGAAGCTGCCACGGCAGAAGAACGGGGACGCCTGAAGGAAGAGTGGGAA
GAAGCTCGAGACACAGCCCGGCGGCGCTCTTTAGGGGAATATCAAATTTATCGGGGAATG
GTTCAAACTGAAGATGTTAACAGAGGCAATCATGCACGACTGTGTGGTTAAACTCCTTAA
GAACCAGGATGAAGAGTCTCTTGAATGCCTTGGCCGTCTGCTCACCACCATGGGCAAAGA
CCTGGACTTTGAAAAGGCCAAGCCCCGAAGGGATCAGTATTTTAACCAGATGGAGAAAAT
CATTAAGGAAAAGAAGACTTCATCCCGAATCCGCTTTATGCTGCAAGATGTGCTGGATCT
GCGACGAAGCAATTGGGTCCCGCGCCGAGGGGACCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6EVI3_SHEEP

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6EVI3_SHEEP

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               90-285, gnl|bosTau2|chr1 (51135419-51135223)
               

               
               90-285, gnl|Hg17|chr3 (185523894-185524090)
               

               
               90-285, gnl|Mm7|chr16 (20231754-20231950)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               90-285, gnl|bosTau2|chr1 (51135419-51135223)
               

               
               90-285, gnl|Hg17|chr3 (185523894-185524090)
               

               
               90-285, gnl|Mm7|chr16 (20231754-20231950)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ecc (0.115035)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)
               

               
               cty (0.10408)

	90-285, gnl\|bosTau2\|chr1 (51135419-51135223)
	90-285, gnl\|Hg17\|chr3 (185523894-185524090)
	90-285, gnl\|Mm7\|chr16 (20231754-20231950)