Non-Coding RNA Search

Ss1.1-Pig4-TMW8003M05.5

Sequence:


               
               GCCAAAAATAATAATAGTAATAAAACTAAAGTTCAGTTTATCCTAATATCTTGCTGACTT
CCATAGACTTTCCAATCATAAGAGTATTTTTAATCTGTTTTAGTGTGGAAAAAAATTTTT
TGGAAGTTAACTTTTGGTTGACTCTGCTGGATCCTAAAAAAGAGTTAATAGAGAAGTGCT
GTTTAATCTTTTTAAAGTATATCCCCTCCTATAAAGCTCTCCAAGTACTTAAACACATGT
GGTCTAGTTACAGTGTAACAATAACGAGGCCTGGGGTATATATACATAATTATACTAAAC
AAATTGCCTGTGGGAGATAACTAGTATTAGAGAATTTATTTCCTAAAAAATGTTAATAAT
ATAAAATTTGAACTGACTAGAATATTGAATCATAGCTTGGTTTATTGCAGCTATCAGCTA
ACATTTGGTTGAACCAAGATAATTTCAAATTATTGTATTGCCACTATTGTTCATTGGTTC
CTTACTTTCTTATAGTTGAATCTTGTGTGACTAGATAATAGACAGCTAAATGTAGAGTAC
CGTATTTCTGAATGAGTTTGTTTTCAAAAGCTTGGCACTGAAGAAATGTGTAGACTCTTT
TGCCTTATTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCAAAAATAATAATAGTAATAAAACTAAAGTTCAGTTTATCCTAATATCTTGCTGACTT
CCATAGACTTTCCAATCATAAGAGTATTTTTAATCTGTTTTAGTGTGGAAAAAAATTTTT
TGGAAGTTAACTTTTGGTTGACTCTGCTGGATCCTAAAAAAGAGTTAATAGAGAAGTGCT
GTTTAATCTTTTTAAAGTATATCCCCTCCTATAAAGCTCTCCAAGTACTTAAACACATGT
GGTCTAGTTACAGTGTAACAATAACGAGGCCTGGGGTATATATACATAATTATACTAAAC
AAATTGCCTGTGGGAGATAACTAGTATTAGAGAATTTATTTCCTAAAAAATGTTAATAAT
ATAAAATTTGAACTGACTAGAATATTGAATCATAGCTTGGTTTATTGCAGCTATCAGCTA
ACATTTGGTTGAACCAAGATAATTTCAAATTATTGTATTGCCACTATTGTTCATTGGTTC
CTTACTTTCTTATAGTTGAATCTTGTGTGACTAGATAATAGACAGCTAAATGTAGAGTAC
CGTATTTCTGAATGAGTTTGTTTTCAAAAGCTTGGCACTGAAGAAATGTGTAGACTCTTT
TGCCTTATTTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               21-612, gnl|bosTau2|chr15 (34212895-34212294)
               

               
               21-612, gnl|Hg17|chr11 (73724231-73723104)
               

               
               21-612, gnl|Mm7|chr7 (96320020-96320624)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-612, gnl|bosTau2|chr15 (34212895-34212294)
               

               
               21-612, gnl|Hg17|chr11 (73724231-73723104)
               

               
               21-612, gnl|Mm7|chr7 (96320020-96320624)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tbr (0.154178)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)

	21-612, gnl\|bosTau2\|chr15 (34212895-34212294)
	21-612, gnl\|Hg17\|chr11 (73724231-73723104)
	21-612, gnl\|Mm7\|chr7 (96320020-96320624)