Ss1.1-Pig4-TMW8004F04.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTCGTGGTCCTCCCGCCATGGCACTGTCGCGGGGGCTGCCCCGGGAGCTGGCCGAGGCC GTGGCCGGCGGCCGGGTCCTGGTGGTGGGCGCGGGAGGCATCGGCTGCGAGCTCCTTAAA AACCTTGTGCTCACCGGCTTCTCACACATCGACCTGATTGATCTGGATACTATTGATGTC AGCAACCTCAACAGACAGTTTTTGTTTCAAAAGAAACATGTTGGAAGATCAAAGGCTCAG GTTGCCAAAGAAAGTGTACTGCAGTTTTACCCGAAAGCTAATATCATAGCCTACCATGAC AGCATCATGAACCCTGACTATAATGTGGAATTTTTTCGACAATTTATATTGGTTATGAAT GCTTTAGATAACAGAGCTGCCCGCAACCATGTTAATAGAATGTGTCTAGCAGCTGATGTC CCTCTTATTGAGAGTGGAACTGCTGGTTATCTTGGGCAAGTAACCACTATCAAAAAGGGT GTGACTGAGTGTTACGAATGTCATCCCAAACCAACCCAGAGAACTTTTCCCGGCTGTACA ATTCGTAACACACCTTCAGAACCTATTCATTGCATCGTTTGGGCGAAATATTTGTTCAAC CAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCTGACCCTGAA GCTTCCTGGGAACCGATGGAAGCTGAAGCCAGAGCCAGAGCATCTAATGAAGATGGTGAC ATTAAACGTATTTCCACTAAGGAATGGGCTAAATCAACTGGATATGATCCAGTTAAACTT TTTACCAAGCTTTTTAAAGATGATATCAGGTATCTGTTGACAATGGACAAACTATGGAGG AAAAGGAAACCTCCGGTTCCTTTGGACTGGGCTGAAGTGCAAAGTCAAGGAGAAGAAACC AATGCATCAGATCAACAAAACGAACCCCAGTTAGGTCTGAAAGACCAGCAGGTTCTAGAT GTAAAGAGCTATGCACGTCTTTTTTCAAAGAGCATTGAGACTTTGAGAGTTCATTTAGCA GAAAAGGGGGATGGAGCTGAGCTCATATGGGACAAGGATGATCCTTCTGCAATGGATTTT GTCACCTCTGCTGCAAATCTCAGGATGCATATTTTCAGTATGAATATGAAGAGCAGATTT GATATCAAATCAATGGCAGGGAACATTATTCCTGCTATCGCTACTACTAATGCAGTGATT GCTGGGTTGATAGTATTGGAAGGATTGAAGATTTTATCAGGAAAAATAGACCAGTGTAGA ACAATTTTTTTGAATAAACAACCAAACCCAAAAAAGAAGCTCCTTGTGCCTTGTGCACTG GATCCTCCCAATCCCAACTGTTACGTATGTGCCAGCAAGCCAGAGGTGACCGTGCGGCTG AACGTCCACAAAGTGACCGTTCTCACGTTGCAGGATAAGATAGTGAAGGAAAAGTTTGCT ATGGTAGCACCAGATGTCCAAATTGAAGATGGAAAAGGAACAATCCTTATATCTTCAGAA GAGGGAGAGACAGAAGCTAATAATCACAAGAAGTTAGCAGAATTTGGAATTAGAAATGGG AGCCGACTTCAAGCAGATGACTTCCTTCAGGACTACACTTTATTGATCAACATCCTTCAT AGCGAAGACCTAGGAAAGGATGTTGAATTTGAAGTTGTTGGTGATGCCCCAGAAAAAGTG GGGCCCAAACAAACTGAAGATGCTGCCAAAAGCATAACCAATGGCAGTGATGACGGAGCT CAGCCTTCCACATCCACAGCACAAGAGCAAGATGATGTGCTCATAGTTGATTCAGATGAA GAAGGTCCCTCAAATAATGCTGACATCAGTGAAGAAGAAAGAAGTCGCAAGAGGAAATTA GAGGAGAAAGAGAACGTCAGTGCAAAAAGGTCACGCATAGAACAGACAGAAGAACTCGAC GACGTTATAGCATTAGATTGAACAGAAATGCCTCTGAACAGAACCCTTGTCCGCATTAGG CCTTCTGGGCAGAACCAGGTTCATTGTTATGTCCTTTGTTCCAAAGGGAAAAATTTGACA CCAGTGACTTAAAGATGATTCTGCTCCCTTTGAAAGCATTCATTTTGCTAGAACTATTAG AAACATTGCAGTATGCTGTATTGAAAGTAGGAATATAGTTTTAAAACCCTTTGAACAAAG TGTGTGCATAACCAGTCATGAGATGAAACAACACAGTGCATGTTGCCTTTTTAATGTAAA TACCTTTAGGTATCATTTAACAGTTTTAAAATATTGTGGTTTAGTAAAGTTGATACCTGG TTATAAATATTATGCCTTTATTTTTGGTTAGAAGAAGAATTATTTTTAGCCTAGATCTAA CCATTTTCATACTCTTAACTGACTGAAACAAATTCAAAGAAGTATTAAGTGCTATGCATT GAAACTTGTTTTTAAATGTTAACTTGGCACTATGTATATTAATGTAAAACAATTGTTAAT TTACTCAAGTTTTCAGCTTGTACTGCCTGGTATGTCTGTAAGAAGCCAATTTTGTGTATT GTTACAGTTTCAGGTTATTTATATTTGATGTTTTGTAAAACTCAAATACGATTATACTGT ACTCCTGGACCAAATAAATGGCATCTGCATACTTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTCGTGGTCCTCCCGCCATGGCACTGTCGCGGGGGCTGCCCCGGGAGCTGGCCGAGGCC GTGGCCGGCGGCCGGGTCCTGGTGGTGGGCGCGGGAGGCATCGGCTGCGAGCTCCTTAAA AACCTTGTGCTCACCGGCTTCTCACACATCGACCTGATTGATCTGGATACTATTGATGTC AGCAACCTCAACAGACAGTTTTTGTTTCAAAAGAAACATGTTGGAAGATCAAAGGCTCAG GTTGCCAAAGAAAGTGTACTGCAGTTTTACCCGAAAGCTAATATCATAGCCTACCATGAC AGCATCATGAACCCTGACTATAATGTGGAATTTTTTCGACAATTTATATTGGTTATGAAT GCTTTAGATAACAGAGCTGCCCGCAACCATGTTAATAGAATGTGTCTAGCAGCTGATGTC CCTCTTATTGAGAGTGGAACTGCTGGTTATCTTGGGCAAGTAACCACTATCAAAAAGGGT GTGACTGAGTGTTACGAATGTCATCCCAAACCAACCCAGAGAACTTTTCCCGGCTGTACA ATTCGTAACACACCTTCAGAACCTATTCATTGCATCGTTTGGGCGAAATATTTGTTCAAC CAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCTGACCCTGAA GCTTCCTGGGAACCGATGGAAGCTGAAGCCAGAGCCAGAGCATCTAATGAAGATGGTGAC ATTAAACGTATTTCCACTAAGGAATGGGCTAAATCAACTGGATATGATCCAGTTAAACTT TTTACCAAGCTTTTTAAAGATGATATCAGGTATCTGTTGACAATGGACAAACTATGGAGG AAAAGGAAACCTCCGGTTCCTTTGGACTGGGCTGAAGTGCAAAGTCAAGGAGAAGAAACC AATGCATCAGATCAACAAAACGAACCCCAGTTAGGTCTGAAAGACCAGCAGGTTCTAGAT GTAAAGAGCTATGCACGTCTTTTTTCAAAGAGCATTGAGACTTTGAGAGTTCATTTAGCA GAAAAGGGGGATGGAGCTGAGCTCATATGGGACAAGGATGATCCTTCTGCAATGGATTTT GTCACCTCTGCTGCAAATCTCAGGATGCATATTTTCAGTATGAATATGAAGAGCAGATTT GATATCAAATCAATGGCAGGGAACATTATTCCTGCTATCGCTACTACTAATGCAGTGATT GCTGGGTTGATAGTATTGGAAGGATTGAAGATTTTATCAGGAAAAATAGACCAGTGTAGA ACAATTTTTTTGAATAAACAACCAAACCCAAAAAAGAAGCTCCTTGTGCCTTGTGCACTG GATCCTCCCAATCCCAACTGTTACGTATGTGCCAGCAAGCCAGAGGTGACCGTGCGGCTG AACGTCCACAAAGTGACCGTTCTCACGTTGCAGGATAAGATAGTGAAGGAAAAGTTTGCT ATGGTAGCACCAGATGTCCAAATTGAAGATGGAAAAGGAACAATCCTTATATCTTCAGAA GAGGGAGAGACAGAAGCTAATAATCACAAGAAGTTAGCAGAATTTGGAATTAGAAATGGG AGCCGACTTCAAGCAGATGACTTCCTTCAGGACTACACTTTATTGATCAACATCCTTCAT AGCGAAGACCTAGGAAAGGATGTTGAATTTGAAGTTGTTGGTGATGCCCCAGAAAAAGTG GGGCCCAAACAAACTGAAGATGCTGCCAAAAGCATAACCAATGGCAGTGATGACGGAGCT CAGCCTTCCACATCCACAGCACAAGAGCAAGATGATGTGCTCATAGTTGATTCAGATGAA GAAGGTCCCTCAAATAATGCTGACATCAGTGAAGAAGAAAGAAGTCGCAAGAGGAAATTA GAGGAGAAAGAGAACGTCAGTGCAAAAAGGTCACGCATAGAACAGACAGAAGAACTCGAC GACGTTATAGCATTAGATTGAACAGAAATGCCTCTGAACAGAACCCTTGTCCGCATTAGG CCTTCTGGGCAGAACCAGGTTCATTGTTATGTCCTTTGTTCCAAAGGGAAAAATTTGACA CCAGTGACTTAAAGATGATTCTGCTCCCTTTGAAAGCATTCATTTTGCTAGAACTATTAG AAACATTGCAGTATGCTGTATTGAAAGTAGGAATATAGTTTTAAAACCCTTTGAACAAAG TGTGTGCATAACCAGTCATGAGATGAAACAACACAGTGCATGTTGCCTTTTTAATGTAAA TACCTTTAGGTATCATTTAACAGTTTTAAAATATTGTGGTTTAGTAAAGTTGATACCTGG TTATAAATATTATGCCTTTATTTTTGGTTAGAAGAAGAATTATTTTTAGCCTAGATCTAA CCATTTTCATACTCTTAACTGACTGAAACAAATTCAAAGAAGTATTAAGTGCTATGCATT GAAACTTGTTTTTAAATGTTAACTTGGCACTATGTATATTAATGTAAAACAATTGTTAAT TTACTCAAGTTTTCAGCTTGTACTGCCTGGTATGTCTGTAAGAAGCCAATTTTGTGTATT GTTACAGTTTCAGGTTATTTATATTTGATGTTTTGTAAAACTCAAATACGATTATACTGT ACTCCTGGACCAAATAAATGGCATCTGCATACTTGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 668-1428, - strand, RNAz p=0.962605 | |
| 678-792, - strand, RNAz p=0.800712 | |
| 1151-1263, - strand, RNAz p=0.654986 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 668-1428, - strand, RNAz p=0.962605 | |
| 678-792, - strand, RNAz p=0.800712 | |
| 1151-1263, - strand, RNAz p=0.654986 |
| Aligned organism(s): 177 entry(ies) | More info |
| Aligned organism(s): 177 entry(ies) | Help | Less info |
| 1-156, gnl|bosTau2|chr18 (38033961-38034116) | |
| 1-156, gnl|Hg17|chr19 (39611160-39611315) | |
| 1-156, gnl|Mm7|chr7 (31056016-31055861) | |
| 476-599, gnl|bosTau2|chr18 (38042125-38042248) | |
| 476-599, gnl|canFam2|chr1 (120783027-120782910) | |
| 476-599, gnl|canFam2|chr1 (120783065-120782898) | |
| 476-599, gnl|danRer3|chr25 (17375298-17375184) | |
| 476-599, gnl|danRer3|chr25 (17375323-17375173) | |
| 476-599, gnl|dasNov1|scaffold_26192 (46090-45972) | |
| 476-599, gnl|dasNov1|scaffold_2901 (82858-83025) | |
| 476-599, gnl|echTel1|scaffold_280978 (46568-46726) | |
| 476-599, gnl|echTel1|scaffold_290479 (11753-11913) | |
| 476-599, gnl|fr1|chrUn (213557298-213557185) | |
| 476-599, gnl|fr1|chrUn (213557301-213557172) | |
| 476-599, gnl|galGal2|chr11 (11436481-11436316) | |
| 476-599, gnl|hg17|chr1 (87223948-87224065) | |
| 476-599, gnl|hg17|chr19 (39621353-39621518) | |
| 476-599, gnl|Hg17|chr19 (39621388-39621511) | |
| 476-599, gnl|loxAfr1|scaffold_13361 (7556-7719) | |
| 476-599, gnl|loxAfr1|scaffold_19218 (1379-1496) | |
| 476-599, gnl|mm7|chr7 (31046427-31046313) | |
| 476-599, gnl|mm7|chr7 (31046467-31046301) | |
| 476-599, gnl|Mm7|chr7 (31046429-31046306) | |
| 476-599, gnl|monDom2|scaffold_35 (1245707-1245540) | |
| 476-599, gnl|monDom2|scaffold_65 (2664699-2664603) | |
| 476-599, gnl|oryCun1|scaffold_101509 (12138-12252) | |
| 476-599, gnl|oryCun1|scaffold_101509 (12095-12264) | |
| 476-599, gnl|panTro1|chr1 (85881731-85881848) | |
| 476-599, gnl|panTro1|chr20 (36178136-36178304) | |
| 476-599, gnl|rheMac2|chr1 (89742475-89742592) | |
| 476-599, gnl|rheMac2|chr19 (41004213-41004380) | |
| 476-599, gnl|rn3|chr1 (86700931-86700767) | |
| 476-599, gnl|rn3|chr13 (91754629-91754746) | |
| 476-599, gnl|tetNig1|chrUn_random (161670674-161670562) | |
| 476-599, gnl|tetNig1|chrUn_random (161670677-161670548) | |
| 476-599, gnl|xenTro1|scaffold_129 (1891103-1890949) | |
| 668-792, gnl|bosTau2|chr18 (38046711-38046835) | |
| 668-792, gnl|canFam2|chr1 (120776228-120776071) | |
| 668-792, gnl|danRer3|chr25 (17372518-17372333) | |
| 668-792, gnl|dasNov1|scaffold_38330 (9138-8981) | |
| 668-792, gnl|echTel1|scaffold_221920 (3974-3828) | |
| 668-792, gnl|galGal2|chr11 (11433456-11433307) | |
| 668-792, gnl|hg17|chr19 (39627729-39627886) | |
| 668-792, gnl|Hg17|chr19 (39627745-39627869) | |
| 668-792, gnl|loxAfr1|scaffold_13361 (14845-14996) | |
| 668-792, gnl|mm7|chr7 (31044870-31044727) | |
| 668-792, gnl|Mm7|chr7 (31044852-31044728) | |
| 668-792, gnl|monDom2|scaffold_35 (1243662-1243507) | |
| 668-792, gnl|oryCun1|scaffold_101509 (21151-21326) | |
| 668-792, gnl|panTro1|chr20 (36184513-36184670) | |
| 668-792, gnl|rheMac2|chr19 (41010509-41010666) | |
| 668-792, gnl|rn3|chr1 (86699232-86699077) | |
| 668-792, gnl|tetNig1|chrUn_random (83277636-83277789) | |
| 668-792, gnl|xenTro1|scaffold_129 (1889395-1889237) | |
| 885-1057, gnl|bosTau2|chr18 (38050472-38050644) | |
| 885-1057, gnl|Hg17|chr19 (39634721-39634893) | |
| 885-1057, gnl|Mm7|chr7 (31042137-31041971) | |
| 1151-1263, gnl|bosTau2|chr18 (38052769-38052881) | |
| 1151-1263, gnl|canFam2|chr1 (120765883-120765995) | |
| 1151-1263, gnl|canFam2|chr1 (120766009-120765918) | |
| 1151-1263, gnl|danRer3|chr25 (17369882-17369965) | |
| 1151-1263, gnl|danRer3|chr25 (17369985-17369889) | |
| 1151-1263, gnl|dasNov1|scaffold_38330 (3492-3392) | |
| 1151-1263, gnl|dasNov1|scaffold_5376 (38087-38201) | |
| 1151-1263, gnl|echTel1|scaffold_277863 (16099-16213) | |
| 1151-1263, gnl|echTel1|scaffold_277863 (16219-16134) | |
| 1151-1263, gnl|fr1|chrUn (304567311-304567420) | |
| 1151-1263, gnl|fr1|chrUn (304567452-304567346) | |
| 1151-1263, gnl|galGal2|chr11 (11430579-11430693) | |
| 1151-1263, gnl|galGal2|chr11 (11430703-11430614) | |
| 1151-1263, gnl|hg17|chr1 (87223310-87223424) | |
| 1151-1263, gnl|hg17|chr19 (39637170-39637267) | |
| 1151-1263, gnl|Hg17|chr19 (39637189-39637301) | |
| 1151-1263, gnl|loxAfr1|scaffold_122486 (291-177) | |
| 1151-1263, gnl|loxAfr1|scaffold_13361 (21974-22061) | |
| 1151-1263, gnl|mm7|chr7 (31038278-31038391) | |
| 1151-1263, gnl|mm7|chr7 (31038407-31038312) | |
| 1151-1263, gnl|Mm7|chr7 (31038388-31038276) | |
| 1151-1263, gnl|monDom2|scaffold_35 (1233275-1233389) | |
| 1151-1263, gnl|monDom2|scaffold_35 (1233401-1233310) | |
| 1151-1263, gnl|oryCun1|scaffold_200987 (6611-6498) | |
| 1151-1263, gnl|oryCun1|scaffold_200987 (6480-6577) | |
| 1151-1263, gnl|panTro1|chr1 (85881094-85881207) | |
| 1151-1263, gnl|panTro1|chr20 (36194039-36194136) | |
| 1151-1263, gnl|rheMac2|chr19 (41021367-41021254) | |
| 1151-1263, gnl|rheMac2|chr19 (41021239-41021333) | |
| 1151-1263, gnl|rn3|chr1 (86693515-86693420) | |
| 1151-1263, gnl|rn3|chr13 (91755412-91755301) | |
| 1151-1263, gnl|tetNig1|chrUn_random (83279532-83279420) | |
| 1151-1263, gnl|tetNig1|chrUn_random (83279392-83279497) | |
| 1151-1263, gnl|xenTro1|scaffold_129 (1885691-1885805) | |
| 1151-1263, gnl|xenTro1|scaffold_129 (1885823-1885726) | |
| 1264-1428, gnl|bosTau2|chr18 (38055228-38055393) | |
| 1264-1428, gnl|canFam2|chr1 (120761587-120761743) | |
| 1264-1428, gnl|canFam2|chr1 (120761745-120761577) | |
| 1264-1428, gnl|danRer3|chr25 (17369543-17369698) | |
| 1264-1428, gnl|danRer3|chr25 (17369703-17369544) | |
| 1264-1428, gnl|dasNov1|scaffold_2901 (103109-103282) | |
| 1264-1428, gnl|dasNov1|scaffold_5376 (37946-38086) | |
| 1264-1428, gnl|echTel1|scaffold_277863 (12248-12404) | |
| 1264-1428, gnl|echTel1|scaffold_277863 (12406-12238) | |
| 1264-1428, gnl|fr1|chrUn (304566773-304566928) | |
| 1264-1428, gnl|fr1|chrUn (304566933-304566774) | |
| 1264-1428, gnl|galGal2|chr11 (11429951-11430093) | |
| 1264-1428, gnl|galGal2|chr11 (11430109-11429930) | |
| 1264-1428, gnl|hg17|chr1 (87223153-87223309) | |
| 1264-1428, gnl|hg17|chr19 (39641513-39641681) | |
| 1264-1428, gnl|Hg17|chr19 (39641514-39641679) | |
| 1264-1428, gnl|loxAfr1|scaffold_11966 (88729-88897) | |
| 1264-1428, gnl|loxAfr1|scaffold_122486 (450-292) | |
| 1264-1428, gnl|mm7|chr7 (31035008-31035164) | |
| 1264-1428, gnl|mm7|chr7 (31035166-31034998) | |
| 1264-1428, gnl|Mm7|chr7 (31035163-31034998) | |
| 1264-1428, gnl|monDom2|scaffold_35 (1233029-1233185) | |
| 1264-1428, gnl|monDom2|scaffold_35 (1233187-1233019) | |
| 1264-1428, gnl|oryCun1|scaffold_200987 (11668-11512) | |
| 1264-1428, gnl|oryCun1|scaffold_200987 (11510-11678) | |
| 1264-1428, gnl|panTro1|chr1 (85880934-85881092) | |
| 1264-1428, gnl|panTro1|chr20 (36198003-36198171) | |
| 1264-1428, gnl|rheMac2|chr19 (41026378-41026222) | |
| 1264-1428, gnl|rheMac2|chr19 (41026220-41026388) | |
| 1264-1428, gnl|rn3|chr1 (86690512-86690344) | |
| 1264-1428, gnl|rn3|chr13 (91755572-91755414) | |
| 1264-1428, gnl|tetNig1|chrUn_random (83280146-83279995) | |
| 1264-1428, gnl|tetNig1|chrUn_random (83279986-83280154) | |
| 1264-1428, gnl|xenTro1|scaffold_129 (1885450-1885606) | |
| 1264-1428, gnl|xenTro1|scaffold_129 (1885608-1885440) | |
| 1515-1632, gnl|bosTau2|chr18 (38059762-38059879) | |
| 1515-1632, gnl|canFam2|chr1 (120755625-120755730) | |
| 1515-1632, gnl|canFam2|chr1 (120755758-120755614) | |
| 1515-1632, gnl|danRer3|chr25 (17367416-17367601) | |
| 1515-1632, gnl|danRer3|chr25 (17367604-17367494) | |
| 1515-1632, gnl|dasNov1|scaffold_2901 (108842-108986) | |
| 1515-1632, gnl|dasNov1|scaffold_5376 (37752-37850) | |
| 1515-1632, gnl|echTel1|scaffold_277863 (7670-7772) | |
| 1515-1632, gnl|echTel1|scaffold_277863 (7804-7659) | |
| 1515-1632, gnl|fr1|chrUn (304566158-304566337) | |
| 1515-1632, gnl|fr1|chrUn (304566343-304566222) | |
| 1515-1632, gnl|galGal2|chr11 (11428554-11428659) | |
| 1515-1632, gnl|galGal2|chr11 (11428687-11428549) | |
| 1515-1632, gnl|hg17|chr1 (87222953-87223058) | |
| 1515-1632, gnl|hg17|chr19 (39646746-39646888) | |
| 1515-1632, gnl|Hg17|chr19 (39646769-39646886) | |
| 1515-1632, gnl|loxAfr1|scaffold_11966 (92494-92633) | |
| 1515-1632, gnl|loxAfr1|scaffold_122486 (649-545) | |
| 1515-1632, gnl|mm7|chr7 (31031979-31032084) | |
| 1515-1632, gnl|mm7|chr7 (31032109-31031968) | |
| 1515-1632, gnl|Mm7|chr7 (31032085-31031968) | |
| 1515-1632, gnl|monDom2|scaffold_35 (1231521-1231626) | |
| 1515-1632, gnl|monDom2|scaffold_35 (1231652-1231510) | |
| 1515-1632, gnl|oryCun1|scaffold_200987 (16783-16678) | |
| 1515-1632, gnl|oryCun1|scaffold_200987 (16655-16794) | |
| 1515-1632, gnl|panTro1|chr1 (85880734-85880839) | |
| 1515-1632, gnl|panTro1|chr20 (36203243-36203385) | |
| 1515-1632, gnl|rheMac2|chr19 (41031555-41031450) | |
| 1515-1632, gnl|rheMac2|chr19 (41031422-41031566) | |
| 1515-1632, gnl|rn3|chr1 (86687112-86686973) | |
| 1515-1632, gnl|rn3|chr13 (91755772-91755667) | |
| 1515-1632, gnl|tetNig1|chrUn_random (83282390-83282194) | |
| 1515-1632, gnl|tetNig1|chrUn_random (83282186-83282310) | |
| 1515-1632, gnl|xenTro1|scaffold_129 (1881695-1881797) | |
| 1515-1632, gnl|xenTro1|scaffold_129 (1881799-1881687) | |
| 1758-2616, gnl|bosTau2|chr18 (38063233-38064095) | |
| 1758-2616, gnl|canFam2|chr1 (120752289-120751429) | |
| 1758-2616, gnl|dasNov1|scaffold_2901 (112037-112897) | |
| 1758-2616, gnl|echTel1|scaffold_277863 (3636-2785) | |
| 1758-2616, gnl|galGal2|chr11 (11426300-11425385) | |
| 1758-2616, gnl|Hg17|chr19 (39651783-39652634) | |
| 1758-2616, gnl|hg17|chr6 (142425703-142426559) | |
| 1758-2616, gnl|loxAfr1|scaffold_122486 (787-1629) | |
| 1758-2616, gnl|mm7|chr7 (31028955-31028185) | |
| 1758-2616, gnl|Mm7|chr7 (31028956-31028184) | |
| 1758-2616, gnl|monDom2|scaffold_35 (1224622-1223741) | |
| 1758-2616, gnl|panTro1|chr5 (145324714-145325571) | |
| 1758-2616, gnl|rheMac2|chr19 (41036068-41036918) | |
| 1758-2616, gnl|rn3|chr13 (91755910-91756721) | |
| 1758-2616, gnl|xenTro1|scaffold_129 (1880350-1879482) |
| Aligned organism(s): 177 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-156, gnl|bosTau2|chr18 (38033961-38034116) | |
| 1-156, gnl|Hg17|chr19 (39611160-39611315) | |
| 1-156, gnl|Mm7|chr7 (31056016-31055861) | |
| 476-599, gnl|bosTau2|chr18 (38042125-38042248) | |
| 476-599, gnl|canFam2|chr1 (120783027-120782910) | |
| 476-599, gnl|canFam2|chr1 (120783065-120782898) | |
| 476-599, gnl|danRer3|chr25 (17375298-17375184) | |
| 476-599, gnl|danRer3|chr25 (17375323-17375173) | |
| 476-599, gnl|dasNov1|scaffold_26192 (46090-45972) | |
| 476-599, gnl|dasNov1|scaffold_2901 (82858-83025) | |
| 476-599, gnl|echTel1|scaffold_280978 (46568-46726) | |
| 476-599, gnl|echTel1|scaffold_290479 (11753-11913) | |
| 476-599, gnl|fr1|chrUn (213557298-213557185) | |
| 476-599, gnl|fr1|chrUn (213557301-213557172) | |
| 476-599, gnl|galGal2|chr11 (11436481-11436316) | |
| 476-599, gnl|hg17|chr1 (87223948-87224065) | |
| 476-599, gnl|hg17|chr19 (39621353-39621518) | |
| 476-599, gnl|Hg17|chr19 (39621388-39621511) | |
| 476-599, gnl|loxAfr1|scaffold_13361 (7556-7719) | |
| 476-599, gnl|loxAfr1|scaffold_19218 (1379-1496) | |
| 476-599, gnl|mm7|chr7 (31046427-31046313) | |
| 476-599, gnl|mm7|chr7 (31046467-31046301) | |
| 476-599, gnl|Mm7|chr7 (31046429-31046306) | |
| 476-599, gnl|monDom2|scaffold_35 (1245707-1245540) | |
| 476-599, gnl|monDom2|scaffold_65 (2664699-2664603) | |
| 476-599, gnl|oryCun1|scaffold_101509 (12138-12252) | |
| 476-599, gnl|oryCun1|scaffold_101509 (12095-12264) | |
| 476-599, gnl|panTro1|chr1 (85881731-85881848) | |
| 476-599, gnl|panTro1|chr20 (36178136-36178304) | |
| 476-599, gnl|rheMac2|chr1 (89742475-89742592) | |
| 476-599, gnl|rheMac2|chr19 (41004213-41004380) | |
| 476-599, gnl|rn3|chr1 (86700931-86700767) | |
| 476-599, gnl|rn3|chr13 (91754629-91754746) | |
| 476-599, gnl|tetNig1|chrUn_random (161670674-161670562) | |
| 476-599, gnl|tetNig1|chrUn_random (161670677-161670548) | |
| 476-599, gnl|xenTro1|scaffold_129 (1891103-1890949) | |
| 668-792, gnl|bosTau2|chr18 (38046711-38046835) | |
| 668-792, gnl|canFam2|chr1 (120776228-120776071) | |
| 668-792, gnl|danRer3|chr25 (17372518-17372333) | |
| 668-792, gnl|dasNov1|scaffold_38330 (9138-8981) | |
| 668-792, gnl|echTel1|scaffold_221920 (3974-3828) | |
| 668-792, gnl|galGal2|chr11 (11433456-11433307) | |
| 668-792, gnl|hg17|chr19 (39627729-39627886) | |
| 668-792, gnl|Hg17|chr19 (39627745-39627869) | |
| 668-792, gnl|loxAfr1|scaffold_13361 (14845-14996) | |
| 668-792, gnl|mm7|chr7 (31044870-31044727) | |
| 668-792, gnl|Mm7|chr7 (31044852-31044728) | |
| 668-792, gnl|monDom2|scaffold_35 (1243662-1243507) | |
| 668-792, gnl|oryCun1|scaffold_101509 (21151-21326) | |
| 668-792, gnl|panTro1|chr20 (36184513-36184670) | |
| 668-792, gnl|rheMac2|chr19 (41010509-41010666) | |
| 668-792, gnl|rn3|chr1 (86699232-86699077) | |
| 668-792, gnl|tetNig1|chrUn_random (83277636-83277789) | |
| 668-792, gnl|xenTro1|scaffold_129 (1889395-1889237) | |
| 885-1057, gnl|bosTau2|chr18 (38050472-38050644) | |
| 885-1057, gnl|Hg17|chr19 (39634721-39634893) | |
| 885-1057, gnl|Mm7|chr7 (31042137-31041971) | |
| 1151-1263, gnl|bosTau2|chr18 (38052769-38052881) | |
| 1151-1263, gnl|canFam2|chr1 (120765883-120765995) | |
| 1151-1263, gnl|canFam2|chr1 (120766009-120765918) | |
| 1151-1263, gnl|danRer3|chr25 (17369882-17369965) | |
| 1151-1263, gnl|danRer3|chr25 (17369985-17369889) | |
| 1151-1263, gnl|dasNov1|scaffold_38330 (3492-3392) | |
| 1151-1263, gnl|dasNov1|scaffold_5376 (38087-38201) | |
| 1151-1263, gnl|echTel1|scaffold_277863 (16099-16213) | |
| 1151-1263, gnl|echTel1|scaffold_277863 (16219-16134) | |
| 1151-1263, gnl|fr1|chrUn (304567311-304567420) | |
| 1151-1263, gnl|fr1|chrUn (304567452-304567346) | |
| 1151-1263, gnl|galGal2|chr11 (11430579-11430693) | |
| 1151-1263, gnl|galGal2|chr11 (11430703-11430614) | |
| 1151-1263, gnl|hg17|chr1 (87223310-87223424) | |
| 1151-1263, gnl|hg17|chr19 (39637170-39637267) | |
| 1151-1263, gnl|Hg17|chr19 (39637189-39637301) | |
| 1151-1263, gnl|loxAfr1|scaffold_122486 (291-177) | |
| 1151-1263, gnl|loxAfr1|scaffold_13361 (21974-22061) | |
| 1151-1263, gnl|mm7|chr7 (31038278-31038391) | |
| 1151-1263, gnl|mm7|chr7 (31038407-31038312) | |
| 1151-1263, gnl|Mm7|chr7 (31038388-31038276) | |
| 1151-1263, gnl|monDom2|scaffold_35 (1233275-1233389) | |
| 1151-1263, gnl|monDom2|scaffold_35 (1233401-1233310) | |
| 1151-1263, gnl|oryCun1|scaffold_200987 (6611-6498) | |
| 1151-1263, gnl|oryCun1|scaffold_200987 (6480-6577) | |
| 1151-1263, gnl|panTro1|chr1 (85881094-85881207) | |
| 1151-1263, gnl|panTro1|chr20 (36194039-36194136) | |
| 1151-1263, gnl|rheMac2|chr19 (41021367-41021254) | |
| 1151-1263, gnl|rheMac2|chr19 (41021239-41021333) | |
| 1151-1263, gnl|rn3|chr1 (86693515-86693420) | |
| 1151-1263, gnl|rn3|chr13 (91755412-91755301) | |
| 1151-1263, gnl|tetNig1|chrUn_random (83279532-83279420) | |
| 1151-1263, gnl|tetNig1|chrUn_random (83279392-83279497) | |
| 1151-1263, gnl|xenTro1|scaffold_129 (1885691-1885805) | |
| 1151-1263, gnl|xenTro1|scaffold_129 (1885823-1885726) | |
| 1264-1428, gnl|bosTau2|chr18 (38055228-38055393) | |
| 1264-1428, gnl|canFam2|chr1 (120761587-120761743) | |
| 1264-1428, gnl|canFam2|chr1 (120761745-120761577) | |
| 1264-1428, gnl|danRer3|chr25 (17369543-17369698) | |
| 1264-1428, gnl|danRer3|chr25 (17369703-17369544) | |
| 1264-1428, gnl|dasNov1|scaffold_2901 (103109-103282) | |
| 1264-1428, gnl|dasNov1|scaffold_5376 (37946-38086) | |
| 1264-1428, gnl|echTel1|scaffold_277863 (12248-12404) | |
| 1264-1428, gnl|echTel1|scaffold_277863 (12406-12238) | |
| 1264-1428, gnl|fr1|chrUn (304566773-304566928) | |
| 1264-1428, gnl|fr1|chrUn (304566933-304566774) | |
| 1264-1428, gnl|galGal2|chr11 (11429951-11430093) | |
| 1264-1428, gnl|galGal2|chr11 (11430109-11429930) | |
| 1264-1428, gnl|hg17|chr1 (87223153-87223309) | |
| 1264-1428, gnl|hg17|chr19 (39641513-39641681) | |
| 1264-1428, gnl|Hg17|chr19 (39641514-39641679) | |
| 1264-1428, gnl|loxAfr1|scaffold_11966 (88729-88897) | |
| 1264-1428, gnl|loxAfr1|scaffold_122486 (450-292) | |
| 1264-1428, gnl|mm7|chr7 (31035008-31035164) | |
| 1264-1428, gnl|mm7|chr7 (31035166-31034998) | |
| 1264-1428, gnl|Mm7|chr7 (31035163-31034998) | |
| 1264-1428, gnl|monDom2|scaffold_35 (1233029-1233185) | |
| 1264-1428, gnl|monDom2|scaffold_35 (1233187-1233019) | |
| 1264-1428, gnl|oryCun1|scaffold_200987 (11668-11512) | |
| 1264-1428, gnl|oryCun1|scaffold_200987 (11510-11678) | |
| 1264-1428, gnl|panTro1|chr1 (85880934-85881092) | |
| 1264-1428, gnl|panTro1|chr20 (36198003-36198171) | |
| 1264-1428, gnl|rheMac2|chr19 (41026378-41026222) | |
| 1264-1428, gnl|rheMac2|chr19 (41026220-41026388) | |
| 1264-1428, gnl|rn3|chr1 (86690512-86690344) | |
| 1264-1428, gnl|rn3|chr13 (91755572-91755414) | |
| 1264-1428, gnl|tetNig1|chrUn_random (83280146-83279995) | |
| 1264-1428, gnl|tetNig1|chrUn_random (83279986-83280154) | |
| 1264-1428, gnl|xenTro1|scaffold_129 (1885450-1885606) | |
| 1264-1428, gnl|xenTro1|scaffold_129 (1885608-1885440) | |
| 1515-1632, gnl|bosTau2|chr18 (38059762-38059879) | |
| 1515-1632, gnl|canFam2|chr1 (120755625-120755730) | |
| 1515-1632, gnl|canFam2|chr1 (120755758-120755614) | |
| 1515-1632, gnl|danRer3|chr25 (17367416-17367601) | |
| 1515-1632, gnl|danRer3|chr25 (17367604-17367494) | |
| 1515-1632, gnl|dasNov1|scaffold_2901 (108842-108986) | |
| 1515-1632, gnl|dasNov1|scaffold_5376 (37752-37850) | |
| 1515-1632, gnl|echTel1|scaffold_277863 (7670-7772) | |
| 1515-1632, gnl|echTel1|scaffold_277863 (7804-7659) | |
| 1515-1632, gnl|fr1|chrUn (304566158-304566337) | |
| 1515-1632, gnl|fr1|chrUn (304566343-304566222) | |
| 1515-1632, gnl|galGal2|chr11 (11428554-11428659) | |
| 1515-1632, gnl|galGal2|chr11 (11428687-11428549) | |
| 1515-1632, gnl|hg17|chr1 (87222953-87223058) | |
| 1515-1632, gnl|hg17|chr19 (39646746-39646888) | |
| 1515-1632, gnl|Hg17|chr19 (39646769-39646886) | |
| 1515-1632, gnl|loxAfr1|scaffold_11966 (92494-92633) | |
| 1515-1632, gnl|loxAfr1|scaffold_122486 (649-545) | |
| 1515-1632, gnl|mm7|chr7 (31031979-31032084) | |
| 1515-1632, gnl|mm7|chr7 (31032109-31031968) | |
| 1515-1632, gnl|Mm7|chr7 (31032085-31031968) | |
| 1515-1632, gnl|monDom2|scaffold_35 (1231521-1231626) | |
| 1515-1632, gnl|monDom2|scaffold_35 (1231652-1231510) | |
| 1515-1632, gnl|oryCun1|scaffold_200987 (16783-16678) | |
| 1515-1632, gnl|oryCun1|scaffold_200987 (16655-16794) | |
| 1515-1632, gnl|panTro1|chr1 (85880734-85880839) | |
| 1515-1632, gnl|panTro1|chr20 (36203243-36203385) | |
| 1515-1632, gnl|rheMac2|chr19 (41031555-41031450) | |
| 1515-1632, gnl|rheMac2|chr19 (41031422-41031566) | |
| 1515-1632, gnl|rn3|chr1 (86687112-86686973) | |
| 1515-1632, gnl|rn3|chr13 (91755772-91755667) | |
| 1515-1632, gnl|tetNig1|chrUn_random (83282390-83282194) | |
| 1515-1632, gnl|tetNig1|chrUn_random (83282186-83282310) | |
| 1515-1632, gnl|xenTro1|scaffold_129 (1881695-1881797) | |
| 1515-1632, gnl|xenTro1|scaffold_129 (1881799-1881687) | |
| 1758-2616, gnl|bosTau2|chr18 (38063233-38064095) | |
| 1758-2616, gnl|canFam2|chr1 (120752289-120751429) | |
| 1758-2616, gnl|dasNov1|scaffold_2901 (112037-112897) | |
| 1758-2616, gnl|echTel1|scaffold_277863 (3636-2785) | |
| 1758-2616, gnl|galGal2|chr11 (11426300-11425385) | |
| 1758-2616, gnl|Hg17|chr19 (39651783-39652634) | |
| 1758-2616, gnl|hg17|chr6 (142425703-142426559) | |
| 1758-2616, gnl|loxAfr1|scaffold_122486 (787-1629) | |
| 1758-2616, gnl|mm7|chr7 (31028955-31028185) | |
| 1758-2616, gnl|Mm7|chr7 (31028956-31028184) | |
| 1758-2616, gnl|monDom2|scaffold_35 (1224622-1223741) | |
| 1758-2616, gnl|panTro1|chr5 (145324714-145325571) | |
| 1758-2616, gnl|rheMac2|chr19 (41036068-41036918) | |
| 1758-2616, gnl|rn3|chr13 (91755910-91756721) | |
| 1758-2616, gnl|xenTro1|scaffold_129 (1880350-1879482) |
| Expressed library(ies): 31 entry(ies) | More info |
| Expressed library(ies): 31 entry(ies) | Help | Less info |
| tra (0.492368) | |
| cty (0.41632) | |
| kid (0.389206) | |
| nlu (0.383362) | |
| pgl (0.35545) | |
| fco (0.314416) | |
| liv (0.292569) | |
| lin (0.291206) | |
| hyp (0.285673) | |
| lnt (0.284616) | |
| sug (0.254582) | |
| cbe (0.239234) | |
| fcc (0.197785) | |
| gul (0.177588) | |
| fty (0.17584) | |
| mcp (0.170648) | |
| eye (0.170503) | |
| nje (0.16592) | |
| tbr (0.154178) | |
| isp (0.150376) | |
| bfe (0.149858) | |
| pty (0.142714) | |
| hlv (0.139256) | |
| ova (0.129132) | |
| ret (0.128733) | |
| thg (0.126791) | |
| bla (0.124347) | |
| eru (0.120048) | |
| med (0.116252) | |
| spc (0.113366) | |
| ldo (0.0970026) |
| Expressed library(ies): 31 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tra (0.492368) | |
| cty (0.41632) | |
| kid (0.389206) | |
| nlu (0.383362) | |
| pgl (0.35545) | |
| fco (0.314416) | |
| liv (0.292569) | |
| lin (0.291206) | |
| hyp (0.285673) | |
| lnt (0.284616) | |
| sug (0.254582) | |
| cbe (0.239234) | |
| fcc (0.197785) | |
| gul (0.177588) | |
| fty (0.17584) | |
| mcp (0.170648) | |
| eye (0.170503) | |
| nje (0.16592) | |
| tbr (0.154178) | |
| isp (0.150376) | |
| bfe (0.149858) | |
| pty (0.142714) | |
| hlv (0.139256) | |
| ova (0.129132) | |
| ret (0.128733) | |
| thg (0.126791) | |
| bla (0.124347) | |
| eru (0.120048) | |
| med (0.116252) | |
| spc (0.113366) | |
| ldo (0.0970026) |