Ss1.1-Pig4-TMW8004G18.3
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TTTTTTTTAGTATTAAAGAGTAACTTTATTTTTAATTGTCACAAATAGAGCTTATTATTT
TAATATTTTCCCAAGTTTCCTACGACATCAGGAACAGTGTCTATTTCCTTTTGAAATTCT
TTTCAGAAATACTTCCCTTAAAGAAAGGTATTCGATATGCTTTCTCTCTTTTAAGAATCC
GTCAACAGAACCAAAGGCGTAAAAATGAAAATTAACGAGTGCTCACCAGCTGTTCTACCT
CATCATTAAAGTTCACAGTTTCTTCACCAGATGCCTCACCTTTAGCGAGGCAGAAGCCCT
AGTTTCCCTGGTCATAAGTGTATTTAAGAGACCGTTAGTCATCAAAAATTAGGCATTTGT
AAAGGAAATACAAGTGAAGCCAGTTAACCAAAGAATCTTAACCAAGATAACTTCATTGTT
ATGAACACCAAGTGTTTTGATTGCCTCACTGAGAGTATCTAATATTCTGGAGAAAGAATG
ATTGACAAATTTTAAATAAGAACTGATAAATTTCAAGAGTTGATAAATTTTAGTCCAAGA
CTAGGCCATAACTTAGAGAACAAATAATCTGACAGTTGACAAGTTGGTTACTTACACTGT
GCAATGAAACTTTATTAATAAGATCTTAAGAAAATACCTCTACCGTATAAGTATATTTGA
CTATTCGGGTTACTTTGGCTTTCGGGGTTGCAAATAAATTGCTTTAGTTCAAACCTAAAG
AATGTACTTTTTAGCTCAAAACGTCAGATCAAGAAAAGCAGCATTTGAAGGAGGAAATAA
AAAAGCTGAAAAAAGAACTGGAAAATTTTGATCCTTCATTTTTTGAAGAAATTGAAGATC
TGAAGTATAATTACAAAGAAGAAGTGAAAAAAAATATTCTCTTAGAAGAGAAGTTAAAAA
AACTTTCTCAACAATTTGGAGTTGAATTAACTAGTCCTGTTGCTGCTTCTGAACAGTCTG
AAGATGACGAGGAGGAAAGTCCTATAAATATCCCCATATGTTAAGGGCCACCTCTAACTG
TAGTTTTATTTAACTGCTTATTAACTTTATAAGTTAAAATTCTATCTGGAAATCAAGCAA
GTCTCTGACCTATGTGGTTTCCTTCCATATCAATACTGTGTACCTTTACTTAAACGGGAA
TTTTTAGTAAATAAAATTATATGAAAATGTCAACATATTAGAAAAAGTGTATTTTTGAAG
ACTTCGAGTAAGTTATGGCTGTCAAATAGTCAGTGAGCTATGGTGAATTTATATACATTC
AAAATGTTTTAAGTTTTTTAAGGAATATGAGGGTAAACTTAACAATTTTAACATTTAAAG
GGGTTTTATATATACTTAGATATTTAATATCTATGTTAAGATTCTCAAATTATATGTGTG
TGTATAAATGTTATGAAGTTGAGCCATATATTTTGTTAAATGTGTAGCAACATTAAATTC
ATTTTAGGGGTTCCCGTTGTGCCTCAGTGGGCTAAGAACCTGATATTATCTCTGTGAGGA
TGTGGGTTCAATCCTTGGCCTTGCTGAATGGGTTAAGGATGCGGTGCTGCACAAGGTGCA
GCACAGGTCAGAGATGTGGCTTGGACCCAGTATGGCTGTGGCTGTGGTGTAGGTTAACAG
CTGCAGCTCCAATTTGACCCCCTGGCCTGGGAACGTCCATATGCTGCAATTGTGGTTATA
GGAAAAAAAGAAAAAAAGAAAAAAAAATACATAAAGTCAGCTTAAACTATTTAATTTTGA
AAGTAAATAACCCCAAATTGTTGCTTTGTCTTTTAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TTTTTTTTAGTATTAAAGAGTAACTTTATTTTTAATTGTCACAAATAGAGCTTATTATTT
TAATATTTTCCCAAGTTTCCTACGACATCAGGAACAGTGTCTATTTCCTTTTGAAATTCT
TTTCAGAAATACTTCCCTTAAAGAAAGGTATTCGATATGCTTTCTCTCTTTTAAGAATCC
GTCAACAGAACCAAAGGCGTAAAAATGAAAATTAACGAGTGCTCACCAGCTGTTCTACCT
CATCATTAAAGTTCACAGTTTCTTCACCAGATGCCTCACCTTTAGCGAGGCAGAAGCCCT
AGTTTCCCTGGTCATAAGTGTATTTAAGAGACCGTTAGTCATCAAAAATTAGGCATTTGT
AAAGGAAATACAAGTGAAGCCAGTTAACCAAAGAATCTTAACCAAGATAACTTCATTGTT
ATGAACACCAAGTGTTTTGATTGCCTCACTGAGAGTATCTAATATTCTGGAGAAAGAATG
ATTGACAAATTTTAAATAAGAACTGATAAATTTCAAGAGTTGATAAATTTTAGTCCAAGA
CTAGGCCATAACTTAGAGAACAAATAATCTGACAGTTGACAAGTTGGTTACTTACACTGT
GCAATGAAACTTTATTAATAAGATCTTAAGAAAATACCTCTACCGTATAAGTATATTTGA
CTATTCGGGTTACTTTGGCTTTCGGGGTTGCAAATAAATTGCTTTAGTTCAAACCTAAAG
AATGTACTTTTTAGCTCAAAACGTCAGATCAAGAAAAGCAGCATTTGAAGGAGGAAATAA
AAAAGCTGAAAAAAGAACTGGAAAATTTTGATCCTTCATTTTTTGAAGAAATTGAAGATC
TGAAGTATAATTACAAAGAAGAAGTGAAAAAAAATATTCTCTTAGAAGAGAAGTTAAAAA
AACTTTCTCAACAATTTGGAGTTGAATTAACTAGTCCTGTTGCTGCTTCTGAACAGTCTG
AAGATGACGAGGAGGAAAGTCCTATAAATATCCCCATATGTTAAGGGCCACCTCTAACTG
TAGTTTTATTTAACTGCTTATTAACTTTATAAGTTAAAATTCTATCTGGAAATCAAGCAA
GTCTCTGACCTATGTGGTTTCCTTCCATATCAATACTGTGTACCTTTACTTAAACGGGAA
TTTTTAGTAAATAAAATTATATGAAAATGTCAACATATTAGAAAAAGTGTATTTTTGAAG
ACTTCGAGTAAGTTATGGCTGTCAAATAGTCAGTGAGCTATGGTGAATTTATATACATTC
AAAATGTTTTAAGTTTTTTAAGGAATATGAGGGTAAACTTAACAATTTTAACATTTAAAG
GGGTTTTATATATACTTAGATATTTAATATCTATGTTAAGATTCTCAAATTATATGTGTG
TGTATAAATGTTATGAAGTTGAGCCATATATTTTGTTAAATGTGTAGCAACATTAAATTC
ATTTTAGGGGTTCCCGTTGTGCCTCAGTGGGCTAAGAACCTGATATTATCTCTGTGAGGA
TGTGGGTTCAATCCTTGGCCTTGCTGAATGGGTTAAGGATGCGGTGCTGCACAAGGTGCA
GCACAGGTCAGAGATGTGGCTTGGACCCAGTATGGCTGTGGCTGTGGTGTAGGTTAACAG
CTGCAGCTCCAATTTGACCCCCTGGCCTGGGAACGTCCATATGCTGCAATTGTGGTTATA
GGAAAAAAAGAAAAAAAGAAAAAAAAATACATAAAGTCAGCTTAAACTATTTAATTTTGA
AAGTAAATAACCCCAAATTGTTGCTTTGTCTTTTAA
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13-563, gnl|bosTau2|chr10 (47296631-47296097) |
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13-563, gnl|Hg17|chr12 (86946396-86945852) |
| |
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652-1281, gnl|bosTau2|chr10 (47296082-47295459) |
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652-1281, gnl|Hg17|chr12 (86945782-86945136) |
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652-1281, gnl|Mm7|chr10 (100059438-100059996) |
| |
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1306-1446, gnl|bosTau2|chr10 (47295463-47295325) |
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1306-1446, gnl|canFam2|chr15 (32207124-32207250) |
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1306-1446, gnl|dasNov1|scaffold_65880 (965-1160) |
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1306-1446, gnl|echTel1|scaffold_289845 (63237-63082) |
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1306-1446, gnl|galGal2|chr1 (39595330-39595510) |
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1306-1446, gnl|hg17|chr12 (86944964-86945150) |
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1306-1446, gnl|Hg17|chr12 (86945169-86944982) |
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1306-1446, gnl|loxAfr1|scaffold_32060 (34379-34210) |
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1306-1446, gnl|mm7|chr10 (100060178-100060012) |
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1306-1446, gnl|monDom2|scaffold_36 (24354527-24354737) |
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1306-1446, gnl|oryCun1|scaffold_211701 (87496-87585) |
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1306-1446, gnl|panTro1|chr10 (89078000-89078186) |
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1306-1446, gnl|rheMac2|chr11 (89171473-89171663) |
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1306-1446, gnl|rn3|chr7 (38248836-38248687) |
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1306-1446, gnl|xenTro1|scaffold_237 (1246501-1246327) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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13-563, gnl|bosTau2|chr10 (47296631-47296097) |
|
13-563, gnl|Hg17|chr12 (86946396-86945852) |
| |
|
652-1281, gnl|bosTau2|chr10 (47296082-47295459) |
|
652-1281, gnl|Hg17|chr12 (86945782-86945136) |
|
652-1281, gnl|Mm7|chr10 (100059438-100059996) |
| |
|
1306-1446, gnl|bosTau2|chr10 (47295463-47295325) |
|
1306-1446, gnl|canFam2|chr15 (32207124-32207250) |
|
1306-1446, gnl|dasNov1|scaffold_65880 (965-1160) |
|
1306-1446, gnl|echTel1|scaffold_289845 (63237-63082) |
|
1306-1446, gnl|galGal2|chr1 (39595330-39595510) |
|
1306-1446, gnl|hg17|chr12 (86944964-86945150) |
|
1306-1446, gnl|Hg17|chr12 (86945169-86944982) |
|
1306-1446, gnl|loxAfr1|scaffold_32060 (34379-34210) |
|
1306-1446, gnl|mm7|chr10 (100060178-100060012) |
|
1306-1446, gnl|monDom2|scaffold_36 (24354527-24354737) |
|
1306-1446, gnl|oryCun1|scaffold_211701 (87496-87585) |
|
1306-1446, gnl|panTro1|chr10 (89078000-89078186) |
|
1306-1446, gnl|rheMac2|chr11 (89171473-89171663) |
|
1306-1446, gnl|rn3|chr7 (38248836-38248687) |
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1306-1446, gnl|xenTro1|scaffold_237 (1246501-1246327) |
|
thg (0.507164) |
|
cbe (0.478469) |
|
spc (0.453463) |
|
vin (0.332557) |
|
fco (0.314416) |
|
liv (0.292569) |
|
spl (0.286369) |
|
sug (0.254582) |
|
tra (0.246184) |
|
tes (0.207814) |
|
sag (0.182715) |
|
gul (0.177588) |
|
fty (0.17584) |
|
fhi (0.169578) |
|
tbr (0.154178) |
|
lin (0.145603) |
|
lnt (0.142308) |
|
lyg (0.133103) |
|
ova (0.129132) |
|
ret (0.128733) |
|
nbm (0.0993246) |
|
thg (0.507164) |
|
cbe (0.478469) |
|
spc (0.453463) |
|
vin (0.332557) |
|
fco (0.314416) |
|
liv (0.292569) |
|
spl (0.286369) |
|
sug (0.254582) |
|
tra (0.246184) |
|
tes (0.207814) |
|
sag (0.182715) |
|
gul (0.177588) |
|
fty (0.17584) |
|
fhi (0.169578) |
|
tbr (0.154178) |
|
lin (0.145603) |
|
lnt (0.142308) |
|
lyg (0.133103) |
|
ova (0.129132) |
|
ret (0.128733) |
|
nbm (0.0993246) |
