Non-Coding RNA Search

Ss1.1-Pig4-TMW8004J12.3

Sequence:


               
               CGAGGACGCAGACACGCGGCGAGAGCATCGCCTGGAGCGCAGGGTCCCGGGCCCCCAGCC
GCCCTCAGGCGCCGAGATGCAGGGAGTCGCGAACCGCCGCCTCGGGCAGTCCCCCGCACA
GGTGACCGCGGCGCCCCCGCTCCTGCTGCTGCTCCTGCTCTCCTGTTGCACGGAGCCTGG
CCGAGGTGCTCCAGTATTGCCTCAAGGATTACAGCCTGAACAAGAGCTACAGTTATGGAA
TGAGATAGATGATGCTTGCTCATCTTTCTTGTCCATGAATTCTCAGCCCCAGGCATCCAG
TGCACTGGAGGAGCTTTGTCTCACAATTCTGGGGACTCTAGCAAAGCCCCAGGAAATAGA
TGAAAAAGATAACACCAAAAGGTTCTTATTTCATTATTCAAAGACACGAAAGTTGGGCAA
TTCAAATGTTGTGTCATCTGTCCTGCATCCGCTGCTGCAGCTCGTTCCACAACTGCATGA
GAGAAGAACGAAGAGATTCAAAGTGGACGAAGAATTCCAAGGTCCTATTGTAAGCCAAAA
TCGAAGATATTTTTTATTCAGGCCGCGCAATGGAAGAAGATCAGAAGGTTACATTTAAAA
TGAATGCCACCCATTTTTTGCAGGAGCAATGCCATGGAATACAAAATATACTGACTTCTT
TTTTTCTTCTTAAAAGCAGTCCTTGCTAAGTTTACAAGTTTGAGAATCTCTGTATTGTAA
AAGTTTTCAGTAAAAGCTGATTGATATTGTAAATGTTTAATTTGTTGAAAATTAAAAAAG
CATCTTAAAATAAAAAAAAAAAAAATTGTAAATGTTAAATAGTGTATAATAAAGCTGTTA
ATAATGATGTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGGACGCAGACACGCGGCGAGAGCATCGCCTGGAGCGCAGGGTCCCGGGCCCCCAGCC
GCCCTCAGGCGCCGAGATGCAGGGAGTCGCGAACCGCCGCCTCGGGCAGTCCCCCGCACA
GGTGACCGCGGCGCCCCCGCTCCTGCTGCTGCTCCTGCTCTCCTGTTGCACGGAGCCTGG
CCGAGGTGCTCCAGTATTGCCTCAAGGATTACAGCCTGAACAAGAGCTACAGTTATGGAA
TGAGATAGATGATGCTTGCTCATCTTTCTTGTCCATGAATTCTCAGCCCCAGGCATCCAG
TGCACTGGAGGAGCTTTGTCTCACAATTCTGGGGACTCTAGCAAAGCCCCAGGAAATAGA
TGAAAAAGATAACACCAAAAGGTTCTTATTTCATTATTCAAAGACACGAAAGTTGGGCAA
TTCAAATGTTGTGTCATCTGTCCTGCATCCGCTGCTGCAGCTCGTTCCACAACTGCATGA
GAGAAGAACGAAGAGATTCAAAGTGGACGAAGAATTCCAAGGTCCTATTGTAAGCCAAAA
TCGAAGATATTTTTTATTCAGGCCGCGCAATGGAAGAAGATCAGAAGGTTACATTTAAAA
TGAATGCCACCCATTTTTTGCAGGAGCAATGCCATGGAATACAAAATATACTGACTTCTT
TTTTTCTTCTTAAAAGCAGTCCTTGCTAAGTTTACAAGTTTGAGAATCTCTGTATTGTAA
AAGTTTTCAGTAAAAGCTGATTGATATTGTAAATGTTTAATTTGTTGAAAATTAAAAAAG
CATCTTAAAATAAAAAAAAAAAAAATTGTAAATGTTAAATAGTGTATAATAAAGCTGTTA
ATAATGATGTTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|462698|sp|P34964|NEUU_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|462698|sp|P34964|NEUU_PIG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               594-852, gnl|bosTau2|chr6 (38960666-38960925)
               

               
               594-852, gnl|Hg17|chr4 (56302515-56302267)
               

               
               594-852, gnl|Mm7|chr5 (76266009-76265769)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               594-852, gnl|bosTau2|chr6 (38960666-38960925)
               

               
               594-852, gnl|Hg17|chr4 (56302515-56302267)
               

               
               594-852, gnl|Mm7|chr5 (76266009-76265769)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cut (0.169924)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)
               

               
               ebs (0.118301)

	594-852, gnl\|bosTau2\|chr6 (38960666-38960925)
	594-852, gnl\|Hg17\|chr4 (56302515-56302267)
	594-852, gnl\|Mm7\|chr5 (76266009-76265769)