Non-Coding RNA Search

Ss1.1-Pig4-TMW8004M11.3

Sequence:


               
               CTCAGCATTCAGCCTCTGTCAAATACATTCCAAGGGGAGGGCCAGAGGCTGGGGGTGGGG
GTGGGGTGGGGGGGCGTGCTTCCTCTGCTTCGGTTTCCAGTATTCATCAGTGTCCCGTCA
TCTCTGTTGCAGGTTATTTGGGAATAGCGGTGCTTGCAGTGCTTGTGGACAGTCTATTCC
TGCGAGCGAGCTGGTCATGCGGGCCCAAGGCAATGTGTATCATCTGAAGGTAGCAGCTGC
TCCTCCCGGTTTGAGAGAACCCGCCTTTCCTGCACGGAGACAGAGCAGGGCCCGTGGTGG
GAACCCTGTTCTCTCCAGCCGCAGTCGCTGACGGAATCCATAGAAACTGTAGCGTGGTGG
TGATCGTTAGGCAGCCCCCAGGCTCCCCTCCGCCCCACCCATCTGTGTTGTTCCCCCTTG
AGCCTGATCCAGTGTCTTGCAGTTTGGCAAGAATCCTGTCCAAAGGAAAAGAATTAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAGCATTCAGCCTCTGTCAAATACATTCCAAGGGGAGGGCCAGAGGCTGGGGGTGGGG
GTGGGGTGGGGGGGCGTGCTTCCTCTGCTTCGGTTTCCAGTATTCATCAGTGTCCCGTCA
TCTCTGTTGCAGGTTATTTGGGAATAGCGGTGCTTGCAGTGCTTGTGGACAGTCTATTCC
TGCGAGCGAGCTGGTCATGCGGGCCCAAGGCAATGTGTATCATCTGAAGGTAGCAGCTGC
TCCTCCCGGTTTGAGAGAACCCGCCTTTCCTGCACGGAGACAGAGCAGGGCCCGTGGTGG
GAACCCTGTTCTCTCCAGCCGCAGTCGCTGACGGAATCCATAGAAACTGTAGCGTGGTGG
TGATCGTTAGGCAGCCCCCAGGCTCCCCTCCGCCCCACCCATCTGTGTTGTTCCCCCTTG
AGCCTGATCCAGTGTCTTGCAGTTTGGCAAGAATCCTGTCCAAAGGAAAAGAATTAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               53-448, gnl|bosTau2|chr3 (41493976-41493561)
               

               
               53-448, gnl|Hg17|chr1 (87517153-87517592)
               

               
               53-448, gnl|Mm7|chr3 (144087534-144087119)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-448, gnl|bosTau2|chr3 (41493976-41493561)
               

               
               53-448, gnl|Hg17|chr1 (87517153-87517592)
               

               
               53-448, gnl|Mm7|chr3 (144087534-144087119)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               sin (0.174948)
               

               
               duo (0.172801)
               

               
               cki (0.165235)
               

               
               fat (0.147427)
               

               
               ebs (0.118301)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               duo (0.172801)
               

               
               cki (0.165235)
               

               
               fat (0.147427)
               

               
               ebs (0.118301)

	53-448, gnl\|bosTau2\|chr3 (41493976-41493561)
	53-448, gnl\|Hg17\|chr1 (87517153-87517592)
	53-448, gnl\|Mm7\|chr3 (144087534-144087119)

	sin (0.174948)
	duo (0.172801)
	cki (0.165235)
	fat (0.147427)
	ebs (0.118301)