Ss1.1-Pig4-TMW8004P18.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAGGCTCGTGATATGGACCTCACTGAAGTTATTACTGGAACCCTGTGGAATCTCTCAT CCCATGACTCAATCAAGATGGAGATTGTGGACCATGCACTGCATGCCTTGACAGATGAAG TGATCATTCCGCATTCTGGTTGGGAACGGGAGCCTAATGAAGATTGTAAGCCACGCCATA TTGAGTGGGAGTCGGTGCTCACCAACACAGCTGGCTGCCTTAGGAATGTCAGCTCCGAGA GGAGTGAAGCTCGCCGGAAACTTCGGGAATGTGATGGTTTGGTGGACGCTCTCATTTTCA TTGTTCAGGCTGAGATTGGACAGAAAGATTCAGACAGCAAGCTTGTGGAGAACTGTGTTT GCCTCCTTCGGAACTTGTCATATCAAGTTCACCGGGAAATCCCACAGGCAGAACGATACC AAGAGGCACCTCCCAATGTTGCCAACAATACTGGGCCACATGCTGCCAGTTGCTTTGGGG CCAAGAAGGGCAAAGATGAGTGGTTCTCCAGAGGGAAAAAACCCACAGAGGATCCAGCAA ATGATGCAGTGGATTTCCCTAAAAGAACTAGTCCTGCTCGAGGCTATGAACTTTTATTTC AACCAGAGGTGGTTCGGATATATATCTCACTCCTCAAAGAGAGCAAGACTCCTGCCATCC TAGAAGCCTCAGCCGGGGCCATCCAGAACTTGTGTGCTGGGCGCTGGACGTATGGTCGAT ACATCCGCTCAGCTCTGCGTCAAGAAAAGGCTCTTTCTGCCATTGCTGACCTCCTGACTA ATGAACATGAGCGGGTTGTGAAAGCTGCGTCTGGAGCACTGAGAAATCTGGCTGTAGATG CTCGCAACAGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAGGCTCGTGATATGGACCTCACTGAAGTTATTACTGGAACCCTGTGGAATCTCTCAT CCCATGACTCAATCAAGATGGAGATTGTGGACCATGCACTGCATGCCTTGACAGATGAAG TGATCATTCCGCATTCTGGTTGGGAACGGGAGCCTAATGAAGATTGTAAGCCACGCCATA TTGAGTGGGAGTCGGTGCTCACCAACACAGCTGGCTGCCTTAGGAATGTCAGCTCCGAGA GGAGTGAAGCTCGCCGGAAACTTCGGGAATGTGATGGTTTGGTGGACGCTCTCATTTTCA TTGTTCAGGCTGAGATTGGACAGAAAGATTCAGACAGCAAGCTTGTGGAGAACTGTGTTT GCCTCCTTCGGAACTTGTCATATCAAGTTCACCGGGAAATCCCACAGGCAGAACGATACC AAGAGGCACCTCCCAATGTTGCCAACAATACTGGGCCACATGCTGCCAGTTGCTTTGGGG CCAAGAAGGGCAAAGATGAGTGGTTCTCCAGAGGGAAAAAACCCACAGAGGATCCAGCAA ATGATGCAGTGGATTTCCCTAAAAGAACTAGTCCTGCTCGAGGCTATGAACTTTTATTTC AACCAGAGGTGGTTCGGATATATATCTCACTCCTCAAAGAGAGCAAGACTCCTGCCATCC TAGAAGCCTCAGCCGGGGCCATCCAGAACTTGTGTGCTGGGCGCTGGACGTATGGTCGAT ACATCCGCTCAGCTCTGCGTCAAGAAAAGGCTCTTTCTGCCATTGCTGACCTCCTGACTA ATGAACATGAGCGGGTTGTGAAAGCTGCGTCTGGAGCACTGAGAAATCTGGCTGTAGATG CTCGCAACAGGG |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 39-224, gnl|bosTau2|chr15 (50918612-50918797) | |
| 39-224, gnl|Hg17|chr11 (57327668-57327853) | |
| 39-224, gnl|Mm7|chr2 (84458988-84458803) | |
| 333-500, gnl|bosTau2|chr15 (50920081-50920248) | |
| 333-500, gnl|canFam2|chr18 (41492710-41492525) | |
| 333-500, gnl|danRer3|chrNA (94128537-94128696) | |
| 333-500, gnl|dasNov1|scaffold_15142 (16008-16192) | |
| 333-500, gnl|echTel1|scaffold_232602 (9054-8869) | |
| 333-500, gnl|fr1|chrUn (240533808-240533625) | |
| 333-500, gnl|galGal2|chr5 (14237909-14237751) | |
| 333-500, gnl|hg17|chr11 (57329910-57330090) | |
| 333-500, gnl|Hg17|chr11 (57329921-57330088) | |
| 333-500, gnl|loxAfr1|scaffold_7507 (25629-25444) | |
| 333-500, gnl|mm7|chr2 (84456833-84456647) | |
| 333-500, gnl|Mm7|chr2 (84456814-84456647) | |
| 333-500, gnl|monDom2|scaffold_33 (20916752-20916929) | |
| 333-500, gnl|oryCun1|scaffold_199299 (57055-57240) | |
| 333-500, gnl|panTro1|chr9 (58239571-58239751) | |
| 333-500, gnl|rheMac2|chr14 (15601666-15601481) | |
| 333-500, gnl|rn3|chr3 (67717726-67717541) | |
| 333-500, gnl|tetNig1|chr1 (6920181-6920014) | |
| 333-500, gnl|xenTro1|scaffold_118 (1089593-1089398) | |
| 710-849, gnl|bosTau2|chr15 (50922235-50922374) | |
| 710-849, gnl|Hg17|chr11 (57332437-57332576) | |
| 710-849, gnl|Mm7|chr2 (84454375-84454236) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 39-224, gnl|bosTau2|chr15 (50918612-50918797) | |
| 39-224, gnl|Hg17|chr11 (57327668-57327853) | |
| 39-224, gnl|Mm7|chr2 (84458988-84458803) | |
| 333-500, gnl|bosTau2|chr15 (50920081-50920248) | |
| 333-500, gnl|canFam2|chr18 (41492710-41492525) | |
| 333-500, gnl|danRer3|chrNA (94128537-94128696) | |
| 333-500, gnl|dasNov1|scaffold_15142 (16008-16192) | |
| 333-500, gnl|echTel1|scaffold_232602 (9054-8869) | |
| 333-500, gnl|fr1|chrUn (240533808-240533625) | |
| 333-500, gnl|galGal2|chr5 (14237909-14237751) | |
| 333-500, gnl|hg17|chr11 (57329910-57330090) | |
| 333-500, gnl|Hg17|chr11 (57329921-57330088) | |
| 333-500, gnl|loxAfr1|scaffold_7507 (25629-25444) | |
| 333-500, gnl|mm7|chr2 (84456833-84456647) | |
| 333-500, gnl|Mm7|chr2 (84456814-84456647) | |
| 333-500, gnl|monDom2|scaffold_33 (20916752-20916929) | |
| 333-500, gnl|oryCun1|scaffold_199299 (57055-57240) | |
| 333-500, gnl|panTro1|chr9 (58239571-58239751) | |
| 333-500, gnl|rheMac2|chr14 (15601666-15601481) | |
| 333-500, gnl|rn3|chr3 (67717726-67717541) | |
| 333-500, gnl|tetNig1|chr1 (6920181-6920014) | |
| 333-500, gnl|xenTro1|scaffold_118 (1089593-1089398) | |
| 710-849, gnl|bosTau2|chr15 (50922235-50922374) | |
| 710-849, gnl|Hg17|chr11 (57332437-57332576) | |
| 710-849, gnl|Mm7|chr2 (84454375-84454236) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) |