Non-Coding RNA Search

Ss1.1-Pig4-TMW8005E03.5

Sequence:


               
               GTGGATGAAGCGGGTCATTGAGGAGCAGCTGCAGCTGGAGAAGGCACGGGAGGCTGAGCT
GCAGATGCTGTTGAGGGAAGAGGCCAAGGAGATGTGGGAAAAGAGAGAGGCAGAATGGGC
CCGGGAGAGGAGCGCTCGAGACCGGCTGATGAGCGAGGTTCTGACAGGGAGACAACAACA
AATACAGGAGAAGATTGAACAAAACCGCCGGGCGCAAGAGGAATCCCTGAGGCACAGGGA
GCAACTTATTCGACATCTTGAGGAAGCAAGAGAGTCAGCTCGTCGTGAGAAGGAGGAGAG
CGAGGAACTGAAATCAGCCAGGAAGCAGGAGCTAGAAGCCCAGGTTGCAGAGCGCCAGCT
GCAGGTATTGGAAGCGGACCAGCAGGAGGAAGAGGAGGAAGAGAAGGCGAGGCAGGCAGA
GCAGCTCACAGATGCCCTGCTGCAGCAGGAGGCAAAGATGATGGCCCAGAAGGGCTACCG
GCCCAAGCCTTATGGACACCCCAGAATTGCTTGGAACTGACATCGCTGGTCCTGTGAGCA
CAGAGAACAAGGATGCCACCCCTGCGGCATATGAGATTTCCTGGGCCAGGGATTGAATCC
AAGCTGGAGCTGCGACCTACACCATAGCTGCAGCAATGCTGGATCCTTAACCCATTGCAC
CACAGCAGGAACTCCTACACAGTTCCGTTTTTAAGGAAATAAAATATTATTTGTGAGTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGATGAAGCGGGTCATTGAGGAGCAGCTGCAGCTGGAGAAGGCACGGGAGGCTGAGCT
GCAGATGCTGTTGAGGGAAGAGGCCAAGGAGATGTGGGAAAAGAGAGAGGCAGAATGGGC
CCGGGAGAGGAGCGCTCGAGACCGGCTGATGAGCGAGGTTCTGACAGGGAGACAACAACA
AATACAGGAGAAGATTGAACAAAACCGCCGGGCGCAAGAGGAATCCCTGAGGCACAGGGA
GCAACTTATTCGACATCTTGAGGAAGCAAGAGAGTCAGCTCGTCGTGAGAAGGAGGAGAG
CGAGGAACTGAAATCAGCCAGGAAGCAGGAGCTAGAAGCCCAGGTTGCAGAGCGCCAGCT
GCAGGTATTGGAAGCGGACCAGCAGGAGGAAGAGGAGGAAGAGAAGGCGAGGCAGGCAGA
GCAGCTCACAGATGCCCTGCTGCAGCAGGAGGCAAAGATGATGGCCCAGAAGGGCTACCG
GCCCAAGCCTTATGGACACCCCAGAATTGCTTGGAACTGACATCGCTGGTCCTGTGAGCA
CAGAGAACAAGGATGCCACCCCTGCGGCATATGAGATTTCCTGGGCCAGGGATTGAATCC
AAGCTGGAGCTGCGACCTACACCATAGCTGCAGCAATGCTGGATCCTTAACCCATTGCAC
CACAGCAGGAACTCCTACACAGTTCCGTTTTTAAGGAAATAAAATATTATTTGTGAGTAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q80ZV6_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q80ZV6_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               146-345, gnl|bosTau2|chr17 (35938400-35938600)
               

               
               146-345, gnl|Hg17|chr12 (108814954-108815154)
               

               
               146-345, gnl|Mm7|chr5 (113940406-113940599)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               146-345, gnl|bosTau2|chr17 (35938400-35938600)
               

               
               146-345, gnl|Hg17|chr12 (108814954-108815154)
               

               
               146-345, gnl|Mm7|chr5 (113940406-113940599)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cov (0.132153)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)

	146-345, gnl\|bosTau2\|chr17 (35938400-35938600)
	146-345, gnl\|Hg17\|chr12 (108814954-108815154)
	146-345, gnl\|Mm7\|chr5 (113940406-113940599)