Ss1.1-Pig4-TMW8005J05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTCCATCGTGCTCATCGAAGGCCTCATTGAAGTGCACGTCAATCCCGGGGATGGAACCA GCCTGAAGAGGGCTCTCCCGAGTGCTCCCACGGGCACCTACAGCGATGGCCAGGAGCACT CCATTTCCTTGATAAGGAGTGGGAGAATTATCACTGTCCAGCTGGATGAGACGACTCCTG TGGACATGAAGTTGGGCCCGTCCACAGAAAGCTGGACAATAAACGTGTCCAACCTATACA TAGGGGGAGTTCCAGAGGGCGTGGAGGCACCTGTGCTCAAGATGAGAAGCTCCTTCCAGG GCTGTATTCAAAACCTGATCTTCAACATGGAACTTTTGGATTTCACCGGTGCCATTGGCT ATGAGCACGTGGACTTGGACTCCTGCTCGCCCTCAGAAAGACCCAAGCTGGCTCTCCCTG GAGAGGATGGCGAACTCCTGCCGGAACCCCAGCCTCTACCGAGTCCAGGAGTGTGTGCCA TGGACAGAGCCCCAGAGTTCATCTCCAACGCCCACCAGTTTGGCCTCACACAGGGCAGCC ACCTCGTGCTGCCCTTTAATCAACTGGTTGTCCGAAGGAGGCTCTCGGTGCAGCTGAGCA TCCGAACGTTCGCCTCCAGCGGCCTGATTTACTACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTCCATCGTGCTCATCGAAGGCCTCATTGAAGTGCACGTCAATCCCGGGGATGGAACCA GCCTGAAGAGGGCTCTCCCGAGTGCTCCCACGGGCACCTACAGCGATGGCCAGGAGCACT CCATTTCCTTGATAAGGAGTGGGAGAATTATCACTGTCCAGCTGGATGAGACGACTCCTG TGGACATGAAGTTGGGCCCGTCCACAGAAAGCTGGACAATAAACGTGTCCAACCTATACA TAGGGGGAGTTCCAGAGGGCGTGGAGGCACCTGTGCTCAAGATGAGAAGCTCCTTCCAGG GCTGTATTCAAAACCTGATCTTCAACATGGAACTTTTGGATTTCACCGGTGCCATTGGCT ATGAGCACGTGGACTTGGACTCCTGCTCGCCCTCAGAAAGACCCAAGCTGGCTCTCCCTG GAGAGGATGGCGAACTCCTGCCGGAACCCCAGCCTCTACCGAGTCCAGGAGTGTGTGCCA TGGACAGAGCCCCAGAGTTCATCTCCAACGCCCACCAGTTTGGCCTCACACAGGGCAGCC ACCTCGTGCTGCCCTTTAATCAACTGGTTGTCCGAAGGAGGCTCTCGGTGCAGCTGAGCA TCCGAACGTTCGCCTCCAGCGGCCTGATTTACTACA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 144-331, gnl|bosTau2|chr11 (31127899-31128086) | |
| 144-331, gnl|canFam2|chr7 (76364519-76364720) | |
| 144-331, gnl|dasNov1|scaffold_7573 (21088-20887) | |
| 144-331, gnl|echTel1|scaffold_222950 (8709-8910) | |
| 144-331, gnl|galGal2|chr2 (98618304-98618103) | |
| 144-331, gnl|hg17|chr18 (6948469-6948670) | |
| 144-331, gnl|Hg17|chr18 (6948663-6948476) | |
| 144-331, gnl|loxAfr1|scaffold_32313 (35195-35396) | |
| 144-331, gnl|mm7|chr17 (66083889-66083688) | |
| 144-331, gnl|Mm7|chr17 (66083693-66083880) | |
| 144-331, gnl|monDom2|scaffold_21 (26365819-26365618) | |
| 144-331, gnl|oryCun1|scaffold_207527 (81829-81628) | |
| 144-331, gnl|panTro1|chr17 (5728296-5728095) | |
| 144-331, gnl|rheMac2|chr18 (7340887-7340686) | |
| 144-331, gnl|rn3|chr9 (107177711-107177510) | |
| 144-331, gnl|tetNig1|chr14 (4451839-4451647) | |
| 144-331, gnl|xenTro1|scaffold_345 (120978-120775) | |
| 466-581, gnl|bosTau2|chr11 (31129357-31129473) | |
| 466-581, gnl|canFam2|chr7 (76360494-76360587) | |
| 466-581, gnl|danRer3|chr5 (751746-751839) | |
| 466-581, gnl|dasNov1|scaffold_7573 (24137-24044) | |
| 466-581, gnl|fr1|chrUn (289134423-289134516) | |
| 466-581, gnl|galGal2|chr2 (98620196-98620107) | |
| 466-581, gnl|hg17|chr18 (6945344-6945437) | |
| 466-581, gnl|Hg17|chr18 (6945467-6945351) | |
| 466-581, gnl|loxAfr1|scaffold_32313 (30743-30836) | |
| 466-581, gnl|mm7|chr17 (66086665-66086576) | |
| 466-581, gnl|Mm7|chr17 (66086544-66086660) | |
| 466-581, gnl|monDom2|scaffold_21 (26367889-26367800) | |
| 466-581, gnl|oryCun1|scaffold_207527 (85644-85551) | |
| 466-581, gnl|panTro1|chr17 (5731440-5731347) | |
| 466-581, gnl|rheMac2|chr18 (7343768-7343675) | |
| 466-581, gnl|rn3|chr9 (107180636-107180547) | |
| 466-581, gnl|tetNig1|chrUn_random (1137531-1137624) | |
| 466-581, gnl|xenTro1|scaffold_345 (122121-122032) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 144-331, gnl|bosTau2|chr11 (31127899-31128086) | |
| 144-331, gnl|canFam2|chr7 (76364519-76364720) | |
| 144-331, gnl|dasNov1|scaffold_7573 (21088-20887) | |
| 144-331, gnl|echTel1|scaffold_222950 (8709-8910) | |
| 144-331, gnl|galGal2|chr2 (98618304-98618103) | |
| 144-331, gnl|hg17|chr18 (6948469-6948670) | |
| 144-331, gnl|Hg17|chr18 (6948663-6948476) | |
| 144-331, gnl|loxAfr1|scaffold_32313 (35195-35396) | |
| 144-331, gnl|mm7|chr17 (66083889-66083688) | |
| 144-331, gnl|Mm7|chr17 (66083693-66083880) | |
| 144-331, gnl|monDom2|scaffold_21 (26365819-26365618) | |
| 144-331, gnl|oryCun1|scaffold_207527 (81829-81628) | |
| 144-331, gnl|panTro1|chr17 (5728296-5728095) | |
| 144-331, gnl|rheMac2|chr18 (7340887-7340686) | |
| 144-331, gnl|rn3|chr9 (107177711-107177510) | |
| 144-331, gnl|tetNig1|chr14 (4451839-4451647) | |
| 144-331, gnl|xenTro1|scaffold_345 (120978-120775) | |
| 466-581, gnl|bosTau2|chr11 (31129357-31129473) | |
| 466-581, gnl|canFam2|chr7 (76360494-76360587) | |
| 466-581, gnl|danRer3|chr5 (751746-751839) | |
| 466-581, gnl|dasNov1|scaffold_7573 (24137-24044) | |
| 466-581, gnl|fr1|chrUn (289134423-289134516) | |
| 466-581, gnl|galGal2|chr2 (98620196-98620107) | |
| 466-581, gnl|hg17|chr18 (6945344-6945437) | |
| 466-581, gnl|Hg17|chr18 (6945467-6945351) | |
| 466-581, gnl|loxAfr1|scaffold_32313 (30743-30836) | |
| 466-581, gnl|mm7|chr17 (66086665-66086576) | |
| 466-581, gnl|Mm7|chr17 (66086544-66086660) | |
| 466-581, gnl|monDom2|scaffold_21 (26367889-26367800) | |
| 466-581, gnl|oryCun1|scaffold_207527 (85644-85551) | |
| 466-581, gnl|panTro1|chr17 (5731440-5731347) | |
| 466-581, gnl|rheMac2|chr18 (7343768-7343675) | |
| 466-581, gnl|rn3|chr9 (107180636-107180547) | |
| 466-581, gnl|tetNig1|chrUn_random (1137531-1137624) | |
| 466-581, gnl|xenTro1|scaffold_345 (122121-122032) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cov (0.132153) |