Non-Coding RNA Search

Ss1.1-Pig4-TMW8005N19.5

Sequence:


               
               GCCCAAAATAAGATGTGTTCACTCAAACTGGAAATGATGAGACTCCTCTTGAGCTTTTTC
CAAAACTAATGTTAGAAAATAACTCTTCTCAAAAGTTACAAATAAACATCATTTGATAAT
ACTTACCAAACGGGTGACAAGCAGGTCCCTCTATGAAGATGGGTGATTATATTAGAATTC
AAGCAGCTGTCCACTTTGTTTCAGTGCCAACATTTTCCATTTGCTTTTAAGTTTCCACAG
TGAACTACTATCTTGGGATCTGCTCAAGAACACTGAGGGAGCATACATGAACTCATGCCC
ACACTTTATAGATGAACAAACTGAGGCCCAGAGATGTTAAAGGATTTCTCCAGGATCACA
CAGCTGAACAGCAGCAGAGAGGACTGGAATGTAGTAGGTTTTCTGACTTGCAGCCCCTGC
ATTTTTTTCTTAACCACATTCATTTTATAAATATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCAAAATAAGATGTGTTCACTCAAACTGGAAATGATGAGACTCCTCTTGAGCTTTTTC
CAAAACTAATGTTAGAAAATAACTCTTCTCAAAAGTTACAAATAAACATCATTTGATAAT
ACTTACCAAACGGGTGACAAGCAGGTCCCTCTATGAAGATGGGTGATTATATTAGAATTC
AAGCAGCTGTCCACTTTGTTTCAGTGCCAACATTTTCCATTTGCTTTTAAGTTTCCACAG
TGAACTACTATCTTGGGATCTGCTCAAGAACACTGAGGGAGCATACATGAACTCATGCCC
ACACTTTATAGATGAACAAACTGAGGCCCAGAGATGTTAAAGGATTTCTCCAGGATCACA
CAGCTGAACAGCAGCAGAGAGGACTGGAATGTAGTAGGTTTTCTGACTTGCAGCCCCTGC
ATTTTTTTCTTAACCACATTCATTTTATAAATATCT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-456, gnl|bosTau2|chr8 (48647775-48647325)
               

               
               1-456, gnl|Hg17|chr9 (101316388-101315932)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-456, gnl|bosTau2|chr8 (48647775-48647325)
               

               
               1-456, gnl|Hg17|chr9 (101316388-101315932)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               rec (0.346141)
               

               
               sin (0.174948)
               

               
               duo (0.172801)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.346141)
               

               
               sin (0.174948)
               

               
               duo (0.172801)

	1-456, gnl\|bosTau2\|chr8 (48647775-48647325)
	1-456, gnl\|Hg17\|chr9 (101316388-101315932)