Ss1.1-Pig4-TMW8006D07.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAGACTTTTCATTAGATATTCCAAGTCAGTTCAGAAATAAGCGCTCTAAGAATCAAGAAA ATGGACCAGTTTGTTCATTACGAGATTGTCTTCGCAGTTTTACCGACTTAGAAGAACTTG ATGAGACAGAGTTATATATGTGCCACAAGTGCAAGAAGAAACAAAAGTCCACTAAAAAGT TTTGGATCCAAAAACTACCCAAGGTGCTATGCTTACATTTGAAGAGATTTCACTGGACTG CATATTTACGAAACAAAGTTGATACATATGTAGAATTTCCCCTGAGAGGCCTAGACATGA AATGCTACTTGCTAGAGCCTGAGAACAGTGGCCCGGAGAACTGCCTGTATGACCTTGCCG CGGTGGTGGTGCACCATGGTTCTGGGGTTGGTTCTGGACATTACACAGCATATGCAACTC ACGAAGGTCGCTGGTTCCATTTCAATGACAGTACTGTAACCCTGACTGATGAAGACACCG TCGTGAAGGCCAAGGCCTACATCCTTTTTTATGTGGAACGCCAGGCCAAAGCTGGATCAG ACAAACTTTAATACCTCCTCCAAATCATTATTCGTCAACTATACCGGACAAACATTTCCA ATTTTCCATAAATACTTGATCCAAGATTTAATTTCATTATGCACTTTTTTAATTTCCTAT TTGGGGTTTAGTTTTGTCAATGGTAGTGACTTATTGAACATGGGCACCAACTAATTTTTT TTTTTTTTTTTTTTTTTTTAGTTCTACCAGAAAACCTCAGCAGATATTTGGATTGGCTGC TTTAGTTGTAATAATTGGGTTTTTATATGTAGGTTCAAGAACTTAGTTCTATTTGACTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAGACTTTTCATTAGATATTCCAAGTCAGTTCAGAAATAAGCGCTCTAAGAATCAAGAAA ATGGACCAGTTTGTTCATTACGAGATTGTCTTCGCAGTTTTACCGACTTAGAAGAACTTG ATGAGACAGAGTTATATATGTGCCACAAGTGCAAGAAGAAACAAAAGTCCACTAAAAAGT TTTGGATCCAAAAACTACCCAAGGTGCTATGCTTACATTTGAAGAGATTTCACTGGACTG CATATTTACGAAACAAAGTTGATACATATGTAGAATTTCCCCTGAGAGGCCTAGACATGA AATGCTACTTGCTAGAGCCTGAGAACAGTGGCCCGGAGAACTGCCTGTATGACCTTGCCG CGGTGGTGGTGCACCATGGTTCTGGGGTTGGTTCTGGACATTACACAGCATATGCAACTC ACGAAGGTCGCTGGTTCCATTTCAATGACAGTACTGTAACCCTGACTGATGAAGACACCG TCGTGAAGGCCAAGGCCTACATCCTTTTTTATGTGGAACGCCAGGCCAAAGCTGGATCAG ACAAACTTTAATACCTCCTCCAAATCATTATTCGTCAACTATACCGGACAAACATTTCCA ATTTTCCATAAATACTTGATCCAAGATTTAATTTCATTATGCACTTTTTTAATTTCCTAT TTGGGGTTTAGTTTTGTCAATGGTAGTGACTTATTGAACATGGGCACCAACTAATTTTTT TTTTTTTTTTTTTTTTTTTAGTTCTACCAGAAAACCTCAGCAGATATTTGGATTGGCTGC TTTAGTTGTAATAATTGGGTTTTTATATGTAGGTTCAAGAACTTAGTTCTATTTGACTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 83-224, gnl|bosTau2|chr10 (31545127-31545266) | |
| 83-224, gnl|canFam2|chr30 (31173926-31174066) | |
| 83-224, gnl|danRer3|chr25 (22537723-22537847) | |
| 83-224, gnl|dasNov1|scaffold_144204 (1807-1671) | |
| 83-224, gnl|echTel1|scaffold_207409 (8447-8307) | |
| 83-224, gnl|fr1|chrUn (157792684-157792547) | |
| 83-224, gnl|galGal2|chr10 (4830319-4830186) | |
| 83-224, gnl|hg17|chr15 (61667544-61667682) | |
| 83-224, gnl|Hg17|chr15 (61667555-61667694) | |
| 83-224, gnl|loxAfr1|scaffold_48046 (2179-2319) | |
| 83-224, gnl|mm7|chr9 (66551073-66550932) | |
| 83-224, gnl|Mm7|chr9 (66551057-66550919) | |
| 83-224, gnl|monDom2|scaffold_12 (50021276-50021135) | |
| 83-224, gnl|oryCun1|scaffold_177047 (54826-54966) | |
| 83-224, gnl|panTro1|chr16 (62126624-62126762) | |
| 83-224, gnl|rheMac2|chr7 (41966766-41966904) | |
| 83-224, gnl|rn3|chr8 (70843428-70843287) | |
| 83-224, gnl|tetNig1|chr13 (7366506-7366374) | |
| 83-224, gnl|xenTro1|scaffold_62 (1243052-1243185) | |
| 385-840, gnl|bosTau2|chr10 (31550239-31550686) | |
| 385-840, gnl|Hg17|chr15 (61669912-61670355) | |
| 385-840, gnl|Mm7|chr9 (66548907-66548473) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 83-224, gnl|bosTau2|chr10 (31545127-31545266) | |
| 83-224, gnl|canFam2|chr30 (31173926-31174066) | |
| 83-224, gnl|danRer3|chr25 (22537723-22537847) | |
| 83-224, gnl|dasNov1|scaffold_144204 (1807-1671) | |
| 83-224, gnl|echTel1|scaffold_207409 (8447-8307) | |
| 83-224, gnl|fr1|chrUn (157792684-157792547) | |
| 83-224, gnl|galGal2|chr10 (4830319-4830186) | |
| 83-224, gnl|hg17|chr15 (61667544-61667682) | |
| 83-224, gnl|Hg17|chr15 (61667555-61667694) | |
| 83-224, gnl|loxAfr1|scaffold_48046 (2179-2319) | |
| 83-224, gnl|mm7|chr9 (66551073-66550932) | |
| 83-224, gnl|Mm7|chr9 (66551057-66550919) | |
| 83-224, gnl|monDom2|scaffold_12 (50021276-50021135) | |
| 83-224, gnl|oryCun1|scaffold_177047 (54826-54966) | |
| 83-224, gnl|panTro1|chr16 (62126624-62126762) | |
| 83-224, gnl|rheMac2|chr7 (41966766-41966904) | |
| 83-224, gnl|rn3|chr8 (70843428-70843287) | |
| 83-224, gnl|tetNig1|chr13 (7366506-7366374) | |
| 83-224, gnl|xenTro1|scaffold_62 (1243052-1243185) | |
| 385-840, gnl|bosTau2|chr10 (31550239-31550686) | |
| 385-840, gnl|Hg17|chr15 (61669912-61670355) | |
| 385-840, gnl|Mm7|chr9 (66548907-66548473) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| eje (0.0988338) |