Non-Coding RNA Search

Ss1.1-Pig4-TMW8006G23.3

Sequence:


               
               AGCAAGGGGGTCAGGTTATCCTTACATGTATACATTACAATTACATTTTTCCCCCCACCC
TTTCTTCTGTTGCAACATGAGTATCTAGACAAAGTTCTCAATGCTATTCAGCAGGATCTC
CTTGTAAATCTATTCTAAGTTGTGTCTGAGCATATTGAAATCTTGATTGAACCCAAAGAA
ATGTTTCTGCCTTCAGAGTGAGTAGGCATGAGTGTGGGTGAAACTTCTGTAAATTGTGGT
ATCCTTGGCATAAATATGAATTAACTAATTTTTAACATATGAAGTAGTTATTAGTATTTA
CTTTTTCCTAAAGTTATGTATTTATTGCCAAGATAACTATAGAAGAATTTCTGGGGAAAT
TCACCTTAAATTTTGGGGATAATTCAAGAAAATGTCTGCAGAAAAATAATTCATAATCTT
AATTTTTGTGGTTAGTCCTTTCAGTTTTTGTAAAACCCCTCATTTAGCTGTTTTGGGGAA
GCCCAGAGTAAATAGTTGGAACCTTATATTTGTTTTACCCTTATTTTTCCTGTTAAGTAA
TGGTTTTAGAATACATCAAGCCTCTTGATTTGTGTTAAGTAACTAATGTTTATAGGATTC
CATTAAATTAATTTTAATAAGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAAGGGGGTCAGGTTATCCTTACATGTATACATTACAATTACATTTTTCCCCCCACCC
TTTCTTCTGTTGCAACATGAGTATCTAGACAAAGTTCTCAATGCTATTCAGCAGGATCTC
CTTGTAAATCTATTCTAAGTTGTGTCTGAGCATATTGAAATCTTGATTGAACCCAAAGAA
ATGTTTCTGCCTTCAGAGTGAGTAGGCATGAGTGTGGGTGAAACTTCTGTAAATTGTGGT
ATCCTTGGCATAAATATGAATTAACTAATTTTTAACATATGAAGTAGTTATTAGTATTTA
CTTTTTCCTAAAGTTATGTATTTATTGCCAAGATAACTATAGAAGAATTTCTGGGGAAAT
TCACCTTAAATTTTGGGGATAATTCAAGAAAATGTCTGCAGAAAAATAATTCATAATCTT
AATTTTTGTGGTTAGTCCTTTCAGTTTTTGTAAAACCCCTCATTTAGCTGTTTTGGGGAA
GCCCAGAGTAAATAGTTGGAACCTTATATTTGTTTTACCCTTATTTTTCCTGTTAAGTAA
TGGTTTTAGAATACATCAAGCCTCTTGATTTGTGTTAAGTAACTAATGTTTATAGGATTC
CATTAAATTAATTTTAATAAGCCT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               149-622, gnl|bosTau2|chr3 (63699380-63699867)
               

               
               149-622, gnl|Hg17|chr1 (52267071-52267582)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               149-622, gnl|bosTau2|chr3 (63699380-63699867)
               

               
               149-622, gnl|Hg17|chr1 (52267071-52267582)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               mga (0.160205)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               ret (0.128733)
               

               
               thg (0.126791)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)
               

               
               kid (0.129735)
               

               
               ova (0.129132)
               

               
               ret (0.128733)
               

               
               thg (0.126791)

	149-622, gnl\|bosTau2\|chr3 (63699380-63699867)
	149-622, gnl\|Hg17\|chr1 (52267071-52267582)

	mga (0.160205)
	kid (0.129735)
	ova (0.129132)
	ret (0.128733)
	thg (0.126791)