Non-Coding RNA Search

Ss1.1-Pig4-TMW8006J04.3

Sequence:


               
               CCCATAGAGTTAGTTGTTCTCCACTGGCGGGGGGAGTCCAGCTGTGTGCATAGTAAAGCA
GGAGGGCCCCTCTGTGGATGCATCCCATGTAGTTCCAGATAGTGGCTGGTGACGGGCAGT
ATAAACCCACAGTTAGGGGAGGCCACAGCCACTGTGTATACAGCAGAGCTTCGGAACCTG
GAGGACCGGCAGCTTTGTTTAGCTCACCTCGGTGCTTTCAAGAAAATCGAGCCACTGCCT
AAGAATCAGGAGATTTCACATCAGAATCAGAAGGTCTGGCTTCTCTTGAACAATCAGAAG
GTGAGGCAACTCTGATCTGCGTTTTCCAAAGAGGACAATCAGTTGGAACTAAGTAGGAGC
TGCCTCTCTTGACAATGCTTATACTCTCTCACCTGGCCTATTCCATTTGTTTGTATTATT
TGCCTGGTGTCTGAGGCATATGAGTCCCTCTTTCCTTTACAAGTTTGTGTTTGAAGGTGA
GCAATGTAGAGTTGATCATTCCTTTTTTAAAAAAAAATCATTATGCCTGCAATTTTACCT
AGCCACCACTAGGCGGAGAGTAAATGTGTACTTAGCTTTCCCTCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCATAGAGTTAGTTGTTCTCCACTGGCGGGGGGAGTCCAGCTGTGTGCATAGTAAAGCA
GGAGGGCCCCTCTGTGGATGCATCCCATGTAGTTCCAGATAGTGGCTGGTGACGGGCAGT
ATAAACCCACAGTTAGGGGAGGCCACAGCCACTGTGTATACAGCAGAGCTTCGGAACCTG
GAGGACCGGCAGCTTTGTTTAGCTCACCTCGGTGCTTTCAAGAAAATCGAGCCACTGCCT
AAGAATCAGGAGATTTCACATCAGAATCAGAAGGTCTGGCTTCTCTTGAACAATCAGAAG
GTGAGGCAACTCTGATCTGCGTTTTCCAAAGAGGACAATCAGTTGGAACTAAGTAGGAGC
TGCCTCTCTTGACAATGCTTATACTCTCTCACCTGGCCTATTCCATTTGTTTGTATTATT
TGCCTGGTGTCTGAGGCATATGAGTCCCTCTTTCCTTTACAAGTTTGTGTTTGAAGGTGA
GCAATGTAGAGTTGATCATTCCTTTTTTAAAAAAAAATCATTATGCCTGCAATTTTACCT
AGCCACCACTAGGCGGAGAGTAAATGTGTACTTAGCTTTCCCTCAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-584, gnl|bosTau2|chr19 (12189233-12189791)
               

               
               5-584, gnl|Hg17|chr17 (28292205-28292778)
               

               
               5-584, gnl|Mm7|chr11 (80903044-80903606)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-584, gnl|bosTau2|chr19 (12189233-12189791)
               

               
               5-584, gnl|Hg17|chr17 (28292205-28292778)
               

               
               5-584, gnl|Mm7|chr11 (80903044-80903606)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sto (0.179824)
               

               
               cst (0.140036)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               cst (0.140036)
               

               
               ecc (0.115035)

	5-584, gnl\|bosTau2\|chr19 (12189233-12189791)
	5-584, gnl\|Hg17\|chr17 (28292205-28292778)
	5-584, gnl\|Mm7\|chr11 (80903044-80903606)