Non-Coding RNA Search

Ss1.1-Pig4-TMW8008C11.5

Sequence:


               
               AGAGTCTGAATGGGACTGATGTAGAAACAAGGTGTTCTGTGGCTGTGGAGATGAGAGCAG
GATCTCAGCTGGGGCCTGGGTATCAGCACCATGCACAGCCCAAGCGCAAGAAGCCATGAA
TTGACAGTCTCAGTAAAGAAAAAACATTTTCATTTGTGTTGGTGATTTCTCCAAAGCCAT
GTCAGAAGCTGTCTTCTGAGTCACCCTGTAAGAACTCCAGCTTTGCTGAATCACAGACCT
CTCAGATCCATCATACACTGGCCTACAAAGATTCCCCCATGGCTCCAAAGATATCTAGGA
TTTAACAAACTTTTTATATTCTATGCCTTACCATATTTAATATTAATGGAGAAAGATCCC
CTTTTCTTATTGCCGTATGAACTTTTATATAATGCTATTTTTTTGTATATTTCTTGTGTA
CTTATAAACTAATTCATGCATGTGTTTATCTTGGCTGATTAAGGAAGAATATATCTAGAT
CACGCTCTATTTTTTATTGTGACTTTTCCACCTCTTGTCTGAATATTTCTTAAGGTTTAT
AAACAAATGCTGCTATTGATTAGCTGCAAGAATGCACTTTAGACATAAAATTGACAATTC
AAACTTCCAAAATAAAGATGTCAGAGACTGGCCAATACTAAAACCATTTTAGGAAGTTGT
TTCGGATTTTATACGTGTATACTTTGACATTTAGATATTCCGAAAGAACTAAAATAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGTCTGAATGGGACTGATGTAGAAACAAGGTGTTCTGTGGCTGTGGAGATGAGAGCAG
GATCTCAGCTGGGGCCTGGGTATCAGCACCATGCACAGCCCAAGCGCAAGAAGCCATGAA
TTGACAGTCTCAGTAAAGAAAAAACATTTTCATTTGTGTTGGTGATTTCTCCAAAGCCAT
GTCAGAAGCTGTCTTCTGAGTCACCCTGTAAGAACTCCAGCTTTGCTGAATCACAGACCT
CTCAGATCCATCATACACTGGCCTACAAAGATTCCCCCATGGCTCCAAAGATATCTAGGA
TTTAACAAACTTTTTATATTCTATGCCTTACCATATTTAATATTAATGGAGAAAGATCCC
CTTTTCTTATTGCCGTATGAACTTTTATATAATGCTATTTTTTTGTATATTTCTTGTGTA
CTTATAAACTAATTCATGCATGTGTTTATCTTGGCTGATTAAGGAAGAATATATCTAGAT
CACGCTCTATTTTTTATTGTGACTTTTCCACCTCTTGTCTGAATATTTCTTAAGGTTTAT
AAACAAATGCTGCTATTGATTAGCTGCAAGAATGCACTTTAGACATAAAATTGACAATTC
AAACTTCCAAAATAAAGATGTCAGAGACTGGCCAATACTAAAACCATTTTAGGAAGTTGT
TTCGGATTTTATACGTGTATACTTTGACATTTAGATATTCCGAAAGAACTAAAATAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               104-719, gnl|bosTau2|chr9 (22412695-22412094)
               

               
               104-719, gnl|Hg17|chr15 (67527185-67527805)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               104-719, gnl|bosTau2|chr9 (22412695-22412094)
               

               
               104-719, gnl|Hg17|chr15 (67527185-67527805)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               rec (0.17307)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               lin (0.145603)

	104-719, gnl\|bosTau2\|chr9 (22412695-22412094)
	104-719, gnl\|Hg17\|chr15 (67527185-67527805)