Non-Coding RNA Search

Ss1.1-Pig4-TMW8010D09.5

Sequence:


               
               GGAACTTCCTGACTCAAAAATAGTAGATACATGACCTGGTACAAAACAAAAAGGCAACTT
CTGTGGTCAAAAGGAAACATTTATTGAGCCTTAACCTTGTGCTAGGATAGGATTTTAACC
TTTTAAGTTGTCACAGAACCTTTTGAAAATCAGAAAACCAAAATAGAACAGGGAAGAAAT
TTTAATTATAAAGGAATTTCTCTCCAGAAAGTTTCTTCTTTTCAATGATGTTAAAAAAAT
AATTCTTTCATACCTTTTCATATTTACTATGTAAATTGTCTCAGAATTTTAAAAAGAGGA
AAAGTTATCCTGTTTACTTTGTGAAGCTAGTATAATTATATCAAAAACATGAAAATGATA
TAACAGTGCTCTCTTTAGGTTTCTGTTGAATATAATCTGAGAAACTTAAGTAGTTTACCA
GAAGGTGTAATTCATCAGTGTTAGTACTGTTTCTTTAAAATCTCTTTCTAAAGAGAATTA
GAGACATCTAAGCAGTATAAGATTATCTTAATTGCTACCTGTAAAGACATTAAGTAAAAT
TCAATACCCTTTAAGACTCCTGCTTCTGGCTAAAGCAGACTAGCTGTATCAGACCACCCC
TGCTGCCAAAAACTGAAAAAACAAGGTGGAACATAAAAAGCAACTCTTTAAAGGCACTGG
AAGCTGCAGTGGTATTGAGAACTTTGAGAGGCCGAGATCCCCCCAAAGAAGGGAAGTCTA
AATTAGAGGCAGAGATGTTCACTGGGGACTCAGGTGTAGGATTGGGCATTGCTGCAGCTG
TAACGTAGATCACTTCTGTGGTGTGGGTTCAATCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAACTTCCTGACTCAAAAATAGTAGATACATGACCTGGTACAAAACAAAAAGGCAACTT
CTGTGGTCAAAAGGAAACATTTATTGAGCCTTAACCTTGTGCTAGGATAGGATTTTAACC
TTTTAAGTTGTCACAGAACCTTTTGAAAATCAGAAAACCAAAATAGAACAGGGAAGAAAT
TTTAATTATAAAGGAATTTCTCTCCAGAAAGTTTCTTCTTTTCAATGATGTTAAAAAAAT
AATTCTTTCATACCTTTTCATATTTACTATGTAAATTGTCTCAGAATTTTAAAAAGAGGA
AAAGTTATCCTGTTTACTTTGTGAAGCTAGTATAATTATATCAAAAACATGAAAATGATA
TAACAGTGCTCTCTTTAGGTTTCTGTTGAATATAATCTGAGAAACTTAAGTAGTTTACCA
GAAGGTGTAATTCATCAGTGTTAGTACTGTTTCTTTAAAATCTCTTTCTAAAGAGAATTA
GAGACATCTAAGCAGTATAAGATTATCTTAATTGCTACCTGTAAAGACATTAAGTAAAAT
TCAATACCCTTTAAGACTCCTGCTTCTGGCTAAAGCAGACTAGCTGTATCAGACCACCCC
TGCTGCCAAAAACTGAAAAAACAAGGTGGAACATAAAAAGCAACTCTTTAAAGGCACTGG
AAGCTGCAGTGGTATTGAGAACTTTGAGAGGCCGAGATCCCCCCAAAGAAGGGAAGTCTA
AATTAGAGGCAGAGATGTTCACTGGGGACTCAGGTGTAGGATTGGGCATTGCTGCAGCTG
TAACGTAGATCACTTCTGTGGTGTGGGTTCAATCCC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               40-237, gnl|bosTau2|chr19 (48022231-48022033)
               

               
               40-237, gnl|Hg17|chr17 (73485164-73485363)
               


               
               501-676, gnl|bosTau2|chr19 (48021964-48021787)
               

               
               501-676, gnl|Hg17|chr17 (73486017-73486193)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-237, gnl|bosTau2|chr19 (48022231-48022033)
               

               
               40-237, gnl|Hg17|chr17 (73485164-73485363)
               


               
               501-676, gnl|bosTau2|chr19 (48021964-48021787)
               

               
               501-676, gnl|Hg17|chr17 (73486017-73486193)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fli (0.202881)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)

	40-237, gnl\|bosTau2\|chr19 (48022231-48022033)
	40-237, gnl\|Hg17\|chr17 (73485164-73485363)

	501-676, gnl\|bosTau2\|chr19 (48021964-48021787)
	501-676, gnl\|Hg17\|chr17 (73486017-73486193)