Ss1.1-Pig4-TMW8011K10.5
|
GCCCGCAGGGGTGTGAGCACACCTCAGGTCCAGCCCTCTTCCCCCACTGAGCATTCCTGA
ACCCCAGCTGCAGCAGCAGACCCTGTAACCTGGGGCCTGGACTGACTTGGGGCAGGGAGG
GGGCTTGTCTGTCTCTATCCATCTCAGAGCGTACTGATTACAGTGAGCAAGCGAGTGTGG
TCACAATGTGCAGAGAGATGGTGGGAAAAGCTGGTGGGACACCGGTTTAAAAACACTCTT
AAATTTGTCTTCACTTTCAGCAGTTGGAAAGCTCTGTTGAGGCTCAGTGCATATGTACCA
GAGTTTGTATCATCAGCCTCATATGAGAGATTTGAATTACGTCAGGTGTTTCCATGAAGG
AAGAGGCAGTCATCTATGATGGTGCTGGGGCTGAGGCAGCACGCTGGTACCCAGATCTCT
GGTCACCTGTAAGAGTTCACTCCACATTCTCACATGCTCAGCTATATTGGTTGATGTAGT
CAGTTGCATTAATTAAATGAACTTGATCATATGTTCTTTTAAACGTTTTATATTAAAAAA
AAATCTGGATTGGCACATTGACTGGGACACAAGAGTGGGACCCAGCAGTTTCTCTCCCAA
AGTGAAGCTTTTCCAGGTTTTGTTGAGAAGACACCTGCCAGCACTTTGGGAAGCTGAAAT
TAACAGAAGCAAATTCACCAGGAGGGAGAGATCTCAGGCCAACATAGGCAGATGAAAGGG
CTATTAAAATTTTTTTTTTTTTTTTTTTACACCTTTGAATATTGCAGGCTTGGTGCAAAG
AGGTCTGCCATCTTTCCCCTGGGATGGGAGATTATCTAGCTCACAGTAGAAGCTCATCAG
TGACAACTCTAGCAGTTATATGGTGTAATAAGTACTGCTCCCAGTGGCAATTAGTGAGAA
AACTATTATAAATTATTTCAACTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCCCGCAGGGGTGTGAGCACACCTCAGGTCCAGCCCTCTTCCCCCACTGAGCATTCCTGA
ACCCCAGCTGCAGCAGCAGACCCTGTAACCTGGGGCCTGGACTGACTTGGGGCAGGGAGG
GGGCTTGTCTGTCTCTATCCATCTCAGAGCGTACTGATTACAGTGAGCAAGCGAGTGTGG
TCACAATGTGCAGAGAGATGGTGGGAAAAGCTGGTGGGACACCGGTTTAAAAACACTCTT
AAATTTGTCTTCACTTTCAGCAGTTGGAAAGCTCTGTTGAGGCTCAGTGCATATGTACCA
GAGTTTGTATCATCAGCCTCATATGAGAGATTTGAATTACGTCAGGTGTTTCCATGAAGG
AAGAGGCAGTCATCTATGATGGTGCTGGGGCTGAGGCAGCACGCTGGTACCCAGATCTCT
GGTCACCTGTAAGAGTTCACTCCACATTCTCACATGCTCAGCTATATTGGTTGATGTAGT
CAGTTGCATTAATTAAATGAACTTGATCATATGTTCTTTTAAACGTTTTATATTAAAAAA
AAATCTGGATTGGCACATTGACTGGGACACAAGAGTGGGACCCAGCAGTTTCTCTCCCAA
AGTGAAGCTTTTCCAGGTTTTGTTGAGAAGACACCTGCCAGCACTTTGGGAAGCTGAAAT
TAACAGAAGCAAATTCACCAGGAGGGAGAGATCTCAGGCCAACATAGGCAGATGAAAGGG
CTATTAAAATTTTTTTTTTTTTTTTTTTACACCTTTGAATATTGCAGGCTTGGTGCAAAG
AGGTCTGCCATCTTTCCCCTGGGATGGGAGATTATCTAGCTCACAGTAGAAGCTCATCAG
TGACAACTCTAGCAGTTATATGGTGTAATAAGTACTGCTCCCAGTGGCAATTAGTGAGAA
AACTATTATAAATTATTTCAACTG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
5-357, gnl|bosTau2|chr10 (6319762-6319421) |
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5-357, gnl|Hg17|chr15 (65270351-65270749) |
| |
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418-924, gnl|bosTau2|chr10 (6319391-6318887) |
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418-924, gnl|canFam2|chr30 (34354088-34355072) |
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418-924, gnl|dasNov1|scaffold_87100 (5704-6689) |
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418-924, gnl|hg17|chr15 (65270579-65271592) |
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418-924, gnl|Hg17|chr15 (65270811-65271329) |
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418-924, gnl|loxAfr1|scaffold_43028 (3135-2139) |
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418-924, gnl|mm7|chr9 (63678253-63677440) |
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418-924, gnl|Mm7|chr9 (63678085-63677638) |
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418-924, gnl|monDom2|scaffold_12 (45177421-45176367) |
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418-924, gnl|oryCun1|scaffold_204411 (12050-12904) |
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418-924, gnl|panTro1|chr16 (65779993-65781008) |
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418-924, gnl|rheMac2|chr7 (45761997-45763002) |
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418-924, gnl|rn3|chr8 (67842832-67842011) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
5-357, gnl|bosTau2|chr10 (6319762-6319421) |
|
5-357, gnl|Hg17|chr15 (65270351-65270749) |
| |
|
418-924, gnl|bosTau2|chr10 (6319391-6318887) |
|
418-924, gnl|canFam2|chr30 (34354088-34355072) |
|
418-924, gnl|dasNov1|scaffold_87100 (5704-6689) |
|
418-924, gnl|hg17|chr15 (65270579-65271592) |
|
418-924, gnl|Hg17|chr15 (65270811-65271329) |
|
418-924, gnl|loxAfr1|scaffold_43028 (3135-2139) |
|
418-924, gnl|mm7|chr9 (63678253-63677440) |
|
418-924, gnl|Mm7|chr9 (63678085-63677638) |
|
418-924, gnl|monDom2|scaffold_12 (45177421-45176367) |
|
418-924, gnl|oryCun1|scaffold_204411 (12050-12904) |
|
418-924, gnl|panTro1|chr16 (65779993-65781008) |
|
418-924, gnl|rheMac2|chr7 (45761997-45763002) |
|
418-924, gnl|rn3|chr8 (67842832-67842011) |
