Non-Coding RNA Search

Ss1.1-Pig4-TMW8011K17.3

Sequence:


               
               AGAACTCTGCACAGCAACTGTGCCTGGATATATTTAATTTTTTAAAGTGTAGACATATAT
TTATGAGTGTGCATTTCATGGCTTCAAAGGAGCCAAGTGACTATACCTGTCTTCCAAGAG
TAACAGAATACTGTCAGAGGTGAAGTTTACTTAATGAATTATTTATGAGAGCCAATTTAA
GGATGACTTTTTTTCTGATTCAGAAGAGAACTTGCTTTTGAAAACCAAGTAATAGGAGCC
ACCAAGCAGTACATGGTGATGTATTCTTGCTAGCAAGTGAGTTTGGTGTTTCGTAGGTCA
AGTGCTTCTGTATCTGATTAGCCAGATGCTTCACCTGATGGAACCAGGGGCTATAAGGTA
TTATAGGTCAGAATAGAAACATGTGGTAACAGCACCTGCCTTTGTTCAATTTAATCCTTG
TTTCACTGTTACTCATGGGCATTTGTGTTTCTACAGAAGAAAGTTGTTCCTGTCACTGGC
AGTATTTGCTCTGGTTTGGTGTCCTATCCTATAAGGAGTATGTGTCATTCCTAATTTTAA
GTTATTTTTAAAAATTCATTGTGTAAATGTTTTCAATTCCCATCTTGACAGTTATGTTCT
TGTGTAGATTTTTCTTAGAAGTACATTTTAATATTATTCATATGCTTCCCAGAGAAGCTA
ATTTAGTTAAAACTAAGGCAAGTTGTGAGGCCTGCGAATAGTCTAAGTGAAAACTAATCA
GAAAACTTAAGGTAGGTTTGCTTGTCTTTTATTCTTCAGTATGAAGGACTATTAATTCTA
TGATAAAAAGTTGCTAAATGGGCTAAAGTTACCAAAAAACAAAAGCCCATTTTATATTTG
TATTCCCTTTTATTTCCAAAATAACATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAACTCTGCACAGCAACTGTGCCTGGATATATTTAATTTTTTAAAGTGTAGACATATAT
TTATGAGTGTGCATTTCATGGCTTCAAAGGAGCCAAGTGACTATACCTGTCTTCCAAGAG
TAACAGAATACTGTCAGAGGTGAAGTTTACTTAATGAATTATTTATGAGAGCCAATTTAA
GGATGACTTTTTTTCTGATTCAGAAGAGAACTTGCTTTTGAAAACCAAGTAATAGGAGCC
ACCAAGCAGTACATGGTGATGTATTCTTGCTAGCAAGTGAGTTTGGTGTTTCGTAGGTCA
AGTGCTTCTGTATCTGATTAGCCAGATGCTTCACCTGATGGAACCAGGGGCTATAAGGTA
TTATAGGTCAGAATAGAAACATGTGGTAACAGCACCTGCCTTTGTTCAATTTAATCCTTG
TTTCACTGTTACTCATGGGCATTTGTGTTTCTACAGAAGAAAGTTGTTCCTGTCACTGGC
AGTATTTGCTCTGGTTTGGTGTCCTATCCTATAAGGAGTATGTGTCATTCCTAATTTTAA
GTTATTTTTAAAAATTCATTGTGTAAATGTTTTCAATTCCCATCTTGACAGTTATGTTCT
TGTGTAGATTTTTCTTAGAAGTACATTTTAATATTATTCATATGCTTCCCAGAGAAGCTA
ATTTAGTTAAAACTAAGGCAAGTTGTGAGGCCTGCGAATAGTCTAAGTGAAAACTAATCA
GAAAACTTAAGGTAGGTTTGCTTGTCTTTTATTCTTCAGTATGAAGGACTATTAATTCTA
TGATAAAAAGTTGCTAAATGGGCTAAAGTTACCAAAAAACAAAAGCCCATTTTATATTTG
TATTCCCTTTTATTTCCAAAATAACATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-808, gnl|bosTau2|chr16 (24868480-24867697)
               

               
               1-808, gnl|Hg17|chr1 (166166714-166165896)
               

               
               1-808, gnl|Mm7|chr1 (164230578-164231345)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-808, gnl|bosTau2|chr16 (24868480-24867697)
               

               
               1-808, gnl|Hg17|chr1 (166166714-166165896)
               

               
               1-808, gnl|Mm7|chr1 (164230578-164231345)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               tbr (0.154178)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)

	1-808, gnl\|bosTau2\|chr16 (24868480-24867697)
	1-808, gnl\|Hg17\|chr1 (166166714-166165896)
	1-808, gnl\|Mm7\|chr1 (164230578-164231345)