Non-Coding RNA Search

Ss1.1-Pig4-TMW8011L10.3

Sequence:


               
               TGAAAGCATAAAACTTGAGCCTGAAAATCCCCCACCATATGAAGAGGCCATGAATGTATC
ACTAAAAAAGTATCAGGAATAAAGGAAGAAGTTAAAGCATCTGAAAGCATTAGTGAAGCT
GTTCAAGAAACAGAAGCTCCTTATATATCTATTGCATGTGATTTAATTAAAGAAACAAAG
CTTTCTACTGAACCAACCGCAGAATTCTCTAGTTACTCAGAAGTAGCAAAAGTTGCACAG
CCAGTGCCTGATCATTCTGATCTAGTTGAAGATTCCTCACCTGATTCTGAGCCAGTTGAC
TTATTTAGTGATGATTCAATACCTGAAGTTCCACAAAAACAAGATGAAGCTGTGATACTT
GTGAAAGAAAATCTCGTTGAAGCCGAGTCAATGATAGAACATGAAAATAAGGAAAAACTC
AGTGCTTCACCATCACCGGAAGGTGGAAAGCCATATTTAGAATCTTTTCAGACCAATTTA
GACACCACAAAAGATACCTTATTACCTGACAAAGTTTCAACATTGACCCAAAAGGAAAAA
ATTCCTTTGCAGATGGAGGAGCTCAACACTTCAGTCTATTCAAATGATGGCTTATTTATT
GCTAAGGAAGCAAAAATACGAGAAAGTGAAACATTTTCAGATTCATCCCCAATTGAGATT
ATAGATGAGTTTCCTACATTGGTCAGTTCTAAAACAGATTTTTCTCCTACATTAGCCGGG
GAATACACTAATCTAGAAGTAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAAAGCATAAAACTTGAGCCTGAAAATCCCCCACCATATGAAGAGGCCATGAATGTATC
ACTAAAAAAGTATCAGGAATAAAGGAAGAAGTTAAAGCATCTGAAAGCATTAGTGAAGCT
GTTCAAGAAACAGAAGCTCCTTATATATCTATTGCATGTGATTTAATTAAAGAAACAAAG
CTTTCTACTGAACCAACCGCAGAATTCTCTAGTTACTCAGAAGTAGCAAAAGTTGCACAG
CCAGTGCCTGATCATTCTGATCTAGTTGAAGATTCCTCACCTGATTCTGAGCCAGTTGAC
TTATTTAGTGATGATTCAATACCTGAAGTTCCACAAAAACAAGATGAAGCTGTGATACTT
GTGAAAGAAAATCTCGTTGAAGCCGAGTCAATGATAGAACATGAAAATAAGGAAAAACTC
AGTGCTTCACCATCACCGGAAGGTGGAAAGCCATATTTAGAATCTTTTCAGACCAATTTA
GACACCACAAAAGATACCTTATTACCTGACAAAGTTTCAACATTGACCCAAAAGGAAAAA
ATTCCTTTGCAGATGGAGGAGCTCAACACTTCAGTCTATTCAAATGATGGCTTATTTATT
GCTAAGGAAGCAAAAATACGAGAAAGTGAAACATTTTCAGATTCATCCCCAATTGAGATT
ATAGATGAGTTTCCTACATTGGTCAGTTCTAAAACAGATTTTTCTCCTACATTAGCCGGG
GAATACACTAATCTAGAAGTAGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|38488990|tpg|DAA01974.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|38488990|tpg|DAA01974.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-744, gnl|bosTau2|chr11 (27916659-27915909)
               

               
               1-744, gnl|Hg17|chr2 (55164948-55164201)
               

               
               1-744, gnl|Mm7|chr11 (29659728-29660454)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-744, gnl|bosTau2|chr11 (27916659-27915909)
               

               
               1-744, gnl|Hg17|chr2 (55164948-55164201)
               

               
               1-744, gnl|Mm7|chr11 (29659728-29660454)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fty (0.17584)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)

	1-744, gnl\|bosTau2\|chr11 (27916659-27915909)
	1-744, gnl\|Hg17\|chr2 (55164948-55164201)
	1-744, gnl\|Mm7\|chr11 (29659728-29660454)