Ss1.1-Pig4-TMW8011O02.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTTTTGCAGAAGTTACAGATCTGGATAATGAGGTGAATAATATGTTGAAACAACTACAG GAAGCAGAAAAGGAGCTAAAGAAAAAACAAGATGATGCTGACCAGGACATGATGATGGCA GGGATGGCTTCACAGGCTGCTCAGGAAGCCGAGATCAATGCCAGAAAGGCCAAAAACTCT GTTACCAACCTCCTCAACCTTATTAATGACCTCTTGGAGCAGCTGGGGCAGCTGGACACA GTGGACCTGAACAAGCTCAATGAGATTGAAGGCACCCTGAACAAAGCCAAAGATGAAATG AAAGTCAGTGATCTCGACAGGAAGGTGTCCAACCTGGAGAATGAAGCCAGGAAGCAGGAG GCTGCCATCATGGACTATAACAGAGACATTGAGGAAATCCTCAAGGACATCCGCAACCTG GAAGACATCAGGAAGACCTTGCCCTCCGGCTGCTTCAACACCCCGTCCATAGAGAAGCCC TAGCGTCCTCCGTTAGGGCTGGAAGGCAGCACCCCGGCCGGGGAGCCATTGTGAGGCCAT AAAGTGCCTTAACACAAAGATTACGTTTTTTCAGACCCCCACTTCTCTGCTGCTCTCCAC CACTGTCCTTTTGAACCAGGAAAAGTCACAAAGTTTAAAGAGAAGCAAATTAAACAGCGT GAATCGGGAACGAAGGGTTTTATCTAATAAAGTCTCTCTTCCACTTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTTTTGCAGAAGTTACAGATCTGGATAATGAGGTGAATAATATGTTGAAACAACTACAG GAAGCAGAAAAGGAGCTAAAGAAAAAACAAGATGATGCTGACCAGGACATGATGATGGCA GGGATGGCTTCACAGGCTGCTCAGGAAGCCGAGATCAATGCCAGAAAGGCCAAAAACTCT GTTACCAACCTCCTCAACCTTATTAATGACCTCTTGGAGCAGCTGGGGCAGCTGGACACA GTGGACCTGAACAAGCTCAATGAGATTGAAGGCACCCTGAACAAAGCCAAAGATGAAATG AAAGTCAGTGATCTCGACAGGAAGGTGTCCAACCTGGAGAATGAAGCCAGGAAGCAGGAG GCTGCCATCATGGACTATAACAGAGACATTGAGGAAATCCTCAAGGACATCCGCAACCTG GAAGACATCAGGAAGACCTTGCCCTCCGGCTGCTTCAACACCCCGTCCATAGAGAAGCCC TAGCGTCCTCCGTTAGGGCTGGAAGGCAGCACCCCGGCCGGGGAGCCATTGTGAGGCCAT AAAGTGCCTTAACACAAAGATTACGTTTTTTCAGACCCCCACTTCTCTGCTGCTCTCCAC CACTGTCCTTTTGAACCAGGAAAAGTCACAAAGTTTAAAGAGAAGCAAATTAAACAGCGT GAATCGGGAACGAAGGGTTTTATCTAATAAAGTCTCTCTTCCACTTAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 1-127, gnl|bosTau2|chr16 (45018990-45019116) | |
| 1-127, gnl|Hg17|chr1 (179838494-179838620) | |
| 1-127, gnl|Mm7|chr1 (153187579-153187453) | |
| 226-498, gnl|bosTau2|chr16 (45023785-45024056) | |
| 226-498, gnl|canFam2|chr7 (19485271-19485551) | |
| 226-498, gnl|danRer3|chr2 (28830798-28831067) | |
| 226-498, gnl|echTel1|scaffold_311727 (51946-52227) | |
| 226-498, gnl|fr1|chrUn (278895675-278895405) | |
| 226-498, gnl|galGal2|chr8 (7523340-7523618) | |
| 226-498, gnl|hg17|chr1 (179843313-179843589) | |
| 226-498, gnl|Hg17|chr1 (179843325-179843621) | |
| 226-498, gnl|loxAfr1|scaffold_10545 (99589-99870) | |
| 226-498, gnl|mm7|chr1 (153182812-153182538) | |
| 226-498, gnl|Mm7|chr1 (153182800-153182508) | |
| 226-498, gnl|monDom2|scaffold_16 (37002247-37002526) | |
| 226-498, gnl|panTro1|chr1 (162460857-162461133) | |
| 226-498, gnl|rheMac2|chr1 (187519486-187519211) | |
| 226-498, gnl|rn3|chr13 (68258369-68258093) | |
| 226-498, gnl|tetNig1|chr15_random (59596-59332) | |
| 226-498, gnl|xenTro1|scaffold_126 (562171-562451) | |
| 521-708, gnl|bosTau2|chr16 (45024054-45024249) | |
| 521-708, gnl|canFam2|chr7 (19485552-19485752) | |
| 521-708, gnl|echTel1|scaffold_311727 (52228-52449) | |
| 521-708, gnl|galGal2|chr8 (7523619-7523827) | |
| 521-708, gnl|hg17|chr1 (179843590-179843793) | |
| 521-708, gnl|Hg17|chr1 (179843619-179843804) | |
| 521-708, gnl|loxAfr1|scaffold_10545 (99871-100077) | |
| 521-708, gnl|mm7|chr1 (153182537-153182342) | |
| 521-708, gnl|Mm7|chr1 (153182510-153182326) | |
| 521-708, gnl|monDom2|scaffold_16 (37002527-37002736) | |
| 521-708, gnl|panTro1|chr1 (162461134-162461337) | |
| 521-708, gnl|rheMac2|chr1 (187519210-187519008) | |
| 521-708, gnl|rn3|chr13 (68258092-68257895) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-127, gnl|bosTau2|chr16 (45018990-45019116) | |
| 1-127, gnl|Hg17|chr1 (179838494-179838620) | |
| 1-127, gnl|Mm7|chr1 (153187579-153187453) | |
| 226-498, gnl|bosTau2|chr16 (45023785-45024056) | |
| 226-498, gnl|canFam2|chr7 (19485271-19485551) | |
| 226-498, gnl|danRer3|chr2 (28830798-28831067) | |
| 226-498, gnl|echTel1|scaffold_311727 (51946-52227) | |
| 226-498, gnl|fr1|chrUn (278895675-278895405) | |
| 226-498, gnl|galGal2|chr8 (7523340-7523618) | |
| 226-498, gnl|hg17|chr1 (179843313-179843589) | |
| 226-498, gnl|Hg17|chr1 (179843325-179843621) | |
| 226-498, gnl|loxAfr1|scaffold_10545 (99589-99870) | |
| 226-498, gnl|mm7|chr1 (153182812-153182538) | |
| 226-498, gnl|Mm7|chr1 (153182800-153182508) | |
| 226-498, gnl|monDom2|scaffold_16 (37002247-37002526) | |
| 226-498, gnl|panTro1|chr1 (162460857-162461133) | |
| 226-498, gnl|rheMac2|chr1 (187519486-187519211) | |
| 226-498, gnl|rn3|chr13 (68258369-68258093) | |
| 226-498, gnl|tetNig1|chr15_random (59596-59332) | |
| 226-498, gnl|xenTro1|scaffold_126 (562171-562451) | |
| 521-708, gnl|bosTau2|chr16 (45024054-45024249) | |
| 521-708, gnl|canFam2|chr7 (19485552-19485752) | |
| 521-708, gnl|echTel1|scaffold_311727 (52228-52449) | |
| 521-708, gnl|galGal2|chr8 (7523619-7523827) | |
| 521-708, gnl|hg17|chr1 (179843590-179843793) | |
| 521-708, gnl|Hg17|chr1 (179843619-179843804) | |
| 521-708, gnl|loxAfr1|scaffold_10545 (99871-100077) | |
| 521-708, gnl|mm7|chr1 (153182537-153182342) | |
| 521-708, gnl|Mm7|chr1 (153182510-153182326) | |
| 521-708, gnl|monDom2|scaffold_16 (37002527-37002736) | |
| 521-708, gnl|panTro1|chr1 (162461134-162461337) | |
| 521-708, gnl|rheMac2|chr1 (187519210-187519008) | |
| 521-708, gnl|rn3|chr13 (68258092-68257895) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| nlu (0.191681) | |
| pla (0.133672) |